RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	KRT85	P78386	507 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	BICD2	Q8TD16	824 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	CLEC4D	Q8WXI8	215 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	BRI3BP	Q8WY22	251 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	HHIPL1	Q96JK4	782 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	AGBL1	Q96MI9	1066 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	ZNF396	Q96N95	335 aa	Predicted RBP	13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	GLT8D2	Q9H1C3	349 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	PNMA2	Q9UL42	364 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	SLC45A1	Q9Y2W3	748 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	PIK3CD	O00329	1044 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	EDIL3	O43854	480 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	SLC10A3	P09131	477 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	TRAPPC10	P48553	1259 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	GNL2	Q13823	731 aa	Known RBP	13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	TMEM132B	Q14DG7	1078 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	USH1G	Q495M9	461 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	RILPL1	Q5EBL4	403 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	RGMB	Q6NW40	437 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	KRT25	Q7Z3Z0	450 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	ANKRD23	Q86SG2	305 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	REXO1	Q8N1G1	1221 aa	Known RBP	13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	MB21D1	Q8N884	522 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	CUL5	Q93034	780 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	P2RX7	Q99572	595 aa	Known RBP	13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	PSTPIP2	Q9H939	334 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	RAVER2	Q9HCJ3	691 aa	Known RBP	13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	POLR3E	Q9NVU0	708 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	RTEL1	Q9NZ71	1219 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	RCOR1	Q9UKL0	485 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	CCPG1	Q9ULG6	757 aa		13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	MRPL11	Q9Y3B7	192 aa	Known RBP	13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.91	□□□□□ -0.18
MATR3-231	ENST00000502394	ELP1	O95163	1332 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	COL11A1	P12107	1806 aa	Predicted RBP	13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	CCL15-CCL14	A0A0B4J2E2	113 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	FAM155A	B1AL88	458 aa	Predicted RBP	13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	BTBD19	C9JJ37	291 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	WNT7A	O00755	349 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	CNMD	O75829	334 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	MRPL12	P52815	198 aa	Known RBP	13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	HERVK_113	P62684	666 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	PTPA	Q15257	358 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	CCL15	Q16663	113 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	UBE2S	Q16763	222 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	PIK3AP1	Q6ZUJ8	805 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	LEO1	Q8WVC0	666 aa	Predicted RBP	13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	LMBRD1	Q9NUN5	540 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	TMEM260	Q9NX78	707 aa		13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	TFIP11	Q9UBB9	837 aa	Known RBP	13.9	□□□□□ -0.18
MATR3-231	ENST00000502394	TMEM88B	A6NKF7	163 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	YEATS4	O95619	227 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	HSD17B4	P51659	736 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	ZNF157	P51786	506 aa	Predicted RBP	13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	IRX3	P78415	501 aa	Predicted RBP	13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	AP3B2	Q13367	1082 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	TKFC	Q3LXA3	575 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	JAKMIP3	Q5VZ66	844 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	ANO1	Q5XXA6	986 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	USP17L6P	Q6QN14	398 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	CPXCR1	Q8N123	301 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	SAMD3	Q8N6K7	520 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	LINC00301	Q8NCQ3	95 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	CRYGN	Q8WXF5	182 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	TBC1D5	Q92609	795 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	PTPN18	Q99952	460 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	MAF1	Q9H063	256 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	GDPD2	Q9HCC8	539 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	BTBD7	Q9P203	1132 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	BIN2	Q9UBW5	565 aa	Predicted RBP	13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	CFAP45	Q9UL16	551 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	RIPK3	Q9Y572	518 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	CLIC4	Q9Y696	253 aa		13.89	□□□□□ -0.19
MATR3-231	ENST00000502394	CCDC194	A0A1B0GVG4	234 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	DDX11L8	A8MPP1	907 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	NFIB	O00712	420 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	FIBP	O43427	364 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	HOXB3	P14651	431 aa	Predicted RBP	13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	OSBP	P22059	807 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	NBR1	Q14596	966 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	NONO	Q15233	471 aa	Known RBP eCLIP	13.88	□□□□□ -0.19	7e-8	■■■■■ 28.9
MATR3-231	ENST00000502394	MUM1L1	Q5H9M0	696 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	MCTP2	Q6DN12	878 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	TEX13B	Q9BXU2	312 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	PCDHB6	Q9Y5E3	794 aa		13.88	□□□□□ -0.19
MATR3-231	ENST00000502394	MANSC4	A6NHS7	340 aa	Predicted RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	SNPH	O15079	494 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	FOS	P01100	380 aa	Predicted RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	ALAS1	P13196	640 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	NCL	P19338	710 aa	Known RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	STAT3	P40763	770 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	SLC39A14	Q15043	492 aa		13.87	□□□□□ -0.19

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