RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ADAMTSL3P82987 1691 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 ADGRL1O94910 1474 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 SART1O43290 800 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 GAS2O43903 313 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 DNAJC8O75937 253 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 CT47B1P0C2W7 299 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 RRM1P23921 792 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 GEMIN4P57678 1058 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLC7A5Q01650 507 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 TRIM28Q13263 835 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 SEPT7Q16181 437 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 PTPN21Q16825 1174 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 CCDC93Q567U6 631 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZC3H12AQ5D1E8 599 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 PRRT3Q5FWE3 981 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZC3H12BQ5HYM0 836 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 TMEM201Q5SNT2 666 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 SYDE2Q5VT97 1194 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 KIAA1211LQ6NV74 962 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 C1orf228Q6PIY5 440 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 UNC5AQ6ZN44 842 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 TOGARAM2Q6ZUX3 1019 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 DYMQ7RTS9 669 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 CREBRFQ8IUR6 639 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 IFNL2Q8IZJ0 200 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 LRRC47Q8N1G4 583 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 GALNT11Q8NCW6 608 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 PPP1R14AQ96A00 147 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 ATG4CQ96DT6 458 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 WDR89Q96FK6 387 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 SCLT1Q96NL6 688 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 GPR101Q96P66 508 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 CDC6Q99741 560 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 SCAPERQ9BY12 1400 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 CFAP74Q9C0B2 1584 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 MTFR1LQ9H019 292 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 CNNM2Q9H8M5 875 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 CACNA2D2Q9NY47 1150 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 LRP2BPQ9P2M1 347 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 SUCOQ9UBS9 1254 aaKnown RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 TRAPPC8Q9Y2L5 1435 aa5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 MORC2Q9Y6X9 1032 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P21-201ENST00000502313 ERBB4Q15303 1308 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 CDC42BPAQ5VT25 1732 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 TIAM1Q13009 1591 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SAMD9LQ8IVG5 1584 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 ANO9A1A5B4 782 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLC22A31A6NKX4 558 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SHISA8B8ZZ34 492 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SUSD5O60279 629 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 FBXO21O94952 628 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 CTSBP07858 339 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 NID1P14543 1247 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 NEK4P51957 841 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 TERF1P54274 439 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 STK3Q13188 491 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 GALEQ14376 348 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SAFBQ15424 915 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZYXQ15942 572 aaKnown RBP5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 LONRF1Q17RB8 773 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 ABCB5Q2M3G0 1257 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 MINDY4Q4G0A6 757 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZBTB37Q5TC79 503 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 INTS3Q68E01 1043 aaKnown RBP5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLC6A19Q695T7 634 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 LVRNQ6Q4G3 990 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SPATS2Q86XZ4 545 aaKnown RBP5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 AHI1Q8N157 1196 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SVOPQ8N4V2 548 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 C12orf50Q8NA57 414 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 CXorf38Q8TB03 319 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 TMEM87BQ96K49 555 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 YIPF2Q9BWQ6 316 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 MRPL18Q9H0U6 180 aaKnown RBP5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 EPN3Q9H201 632 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 INTS7Q9NVH2 962 aaKnown RBP5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 GTF2IRD1Q9UHL9 959 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 HDAC9Q9UKV0 1011 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 PHTF1Q9UMS5 762 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 SPEF1Q9Y4P9 236 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZNF518AQ6AHZ1 1483 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 LRRC9Q6ZRR7 1453 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 MYO5CQ9NQX4 1742 aa5.26□□□□□ -1.57
HMGB1P21-201ENST00000502313 FRMPD2Q68DX3 1309 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 SYNGAP1Q96PV0 1343 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 LTBP3Q9NS15 1303 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 AGLP35573 1532 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 EHBP1L1Q8N3D4 1523 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 NEMP1O14524 444 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 TNFRSF10CO14798 259 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 TMPRSS2O15393 492 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 ADAM11O75078 769 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 CLEC3AO75596 197 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 APPP05067 770 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 CELA2BP08218 269 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 PF4V1P10720 104 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 ADH5P11766 374 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 CASP2P42575 452 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZNF280AP59817 542 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 TOMM20Q15388 145 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms