RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 PRKCSHP14314 528 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 TRAPPC10P48553 1259 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 FKBP15Q5T1M5 1219 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 SUGCTQ9HAC7 445 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 NRBP2Q9NSY0 501 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 TMEM88BA6NKF7 163 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 YEATS4O95619 227 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 PTPRAP18433 802 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 MTMR1Q13613 665 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 SEPT11Q9NVA2 429 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 SLC25A27O95847 323 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 PKP1Q13835 747 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 BAATQ14032 418 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 SPDYE4A6NLX3 237 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 FCGRTP55899 365 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 CUL4AQ13619 759 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 FAM102BQ5T8I3 360 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 RGMBQ6NW40 437 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 ALDH8A1Q9H2A2 487 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 ZNHIT6Q9NWK9 470 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 MYL3P08590 195 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 FAM160A1Q05DH4 1040 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 STRN3Q13033 797 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 HS2ST1Q7LGA3 356 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 MYCT1Q8N699 235 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 SEPT9Q9UHD8 586 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 ASB14A6NK59 587 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 PSMA7O14818 248 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 CETN1Q12798 172 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 MAD2L2Q9UI95 211 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 GUCY1A2P33402 732 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 SPC24Q8NBT2 197 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 GMCL1P1Q8NEA9 526 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 KIAA1683Q9H0B3 1180 aa10.6□□□□□ -0.71
GAPVD1-219ENST00000495955 ALDH1A1P00352 501 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 ATP6V0A1Q93050 837 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 CLIC6Q96NY7 704 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 MAP7D2Q96T17 732 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 DNAI2Q9GZS0 605 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 SETQ01105 290 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 PPIL2Q13356 520 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 STAMQ92783 540 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 TTC12Q9H892 705 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 RIC8AQ9NPQ8 531 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 TBC1D7Q9P0N9 293 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 IRF6O14896 467 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 KRT13P13646 458 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 GCLCP48506 637 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 POLGP54098 1239 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 FKBP1BP68106 108 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 TTLL4Q14679 1199 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 APBB1IPQ7Z5R6 666 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 FAM114A1Q8IWE2 563 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 MTMR14Q8NCE2 650 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 CLMNQ96JQ2 1002 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 LAD1O00515 517 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 PHACTR2O75167 634 aa10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 TRIM6Q9C030 488 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 ZNF215Q9UL58 517 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-219ENST00000495955 PITPNM2Q9BZ72 1349 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 SMIM22K7EJ46 135 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 MARK3P27448 753 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 ARHGAP4P98171 946 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 ZFYVE27Q5T4F4 411 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 USP37Q86T82 979 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 DEF6Q9H4E7 631 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 IL17RBQ9NRM6 502 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 TBC1D12O60347 775 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 TRPA1O75762 1119 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 CYP2C8P10632 490 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 KLHL40Q2TBA0 621 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 Q3C1V9 767 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 GPBP1Q86WP2 473 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 CHST13Q8NET6 341 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 NUP98P52948 1817 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 PSAPP07602 524 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 MRE11P49959 708 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 KIAA1024Q9UPX6 916 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 TMOD1P28289 359 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 ODF2Q5BJF6 829 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 KLRG1Q96E93 195 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 PPP1R9AQ9ULJ8 1098 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 PCDHB6Q9Y5E3 794 aa10.58□□□□□ -0.72
GAPVD1-219ENST00000495955 ZNF202O95125 648 aa10.57□□□□□ -0.72
GAPVD1-219ENST00000495955 LONP1P36776 959 aaKnown RBP10.57□□□□□ -0.72
GAPVD1-219ENST00000495955 HSP90AA4PQ58FG1 418 aa10.57□□□□□ -0.72
GAPVD1-219ENST00000495955 DEPTORQ8TB45 409 aa10.57□□□□□ -0.72
GAPVD1-219ENST00000495955 BLZF1Q9H2G9 400 aa10.57□□□□□ -0.72
GAPVD1-219ENST00000495955 KCNH4Q9UQ05 1017 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms