RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 CDK11AQ9UQ88 783 aaPredicted RBP10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 LRRC10BA6NIK2 292 aa10.86□□□□□ -0.67
HMGB3P14-201ENST00000494195 MEFVO15553 781 aaPredicted RBP10.86□□□□□ -0.67
HMGB3P14-201ENST00000494195 ADCY3O60266 1144 aa10.86□□□□□ -0.67
HMGB3P14-201ENST00000494195 BMS1Q14692 1282 aaKnown RBP10.86□□□□□ -0.67
HMGB3P14-201ENST00000494195 ZSWIM4Q9H7M6 989 aa10.86□□□□□ -0.67
HMGB3P14-201ENST00000494195 KDM2BQ8NHM5 1336 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 C7orf72A4D263 438 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 PRODHO43272 600 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 DLX3O60479 287 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 NPHS1O60500 1241 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 MSL3P1P0C860 447 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 PABPC1P11940 636 aaKnown RBP10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 KCNAB2Q13303 367 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 TESK1Q15569 626 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 MLANAQ16655 118 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 CCDC144BQ3MJ40 725 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 MBLAC2Q68D91 279 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 PRR23BQ6ZRT6 265 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 PPIL6Q8IXY8 311 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 ZBTB38Q8NAP3 1195 aaPredicted RBP10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 DNAJC7Q99615 494 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 PDLIM7Q9NR12 457 aa10.85□□□□□ -0.67
HMGB3P14-201ENST00000494195 PDE6BP35913 854 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 ERVFRD-1P60508 538 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 ADGRF1Q5T601 910 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 NSMFQ6X4W1 530 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 DIO2Q92813 273 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 USP35Q9P2H5 1018 aa10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 TMEFF2Q9UIK5 374 aaPredicted RBP10.84□□□□□ -0.67
HMGB3P14-201ENST00000494195 OR14I1A6ND48 311 aa10.83□□□□□ -0.68
HMGB3P14-201ENST00000494195 YOD1Q5VVQ6 348 aaPredicted RBP10.83□□□□□ -0.68
HMGB3P14-201ENST00000494195 DENND5AQ6IQ26 1287 aa10.83□□□□□ -0.68
HMGB3P14-201ENST00000494195 CCDC103Q8IW40 242 aa10.83□□□□□ -0.68
HMGB3P14-201ENST00000494195 NSUN3Q9H649 340 aaKnown RBP10.83□□□□□ -0.68
HMGB3P14-201ENST00000494195 TNFRSF12AQ9NP84 129 aa10.83□□□□□ -0.68
HMGB3P14-201ENST00000494195 A0A1W2PQJ5 194 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 ARNTLO00327 626 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 LONRF2Q1L5Z9 754 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 INF2Q27J81 1249 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 DPH6Q7L8W6 267 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 MRFAP1L1Q96HT8 127 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 DIRC2Q96SL1 478 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 EPB41L4BQ9H329 900 aa10.82□□□□□ -0.68
HMGB3P14-201ENST00000494195 FAM153BP0C7A2 387 aa10.81□□□□□ -0.68
HMGB3P14-201ENST00000494195 LTBRP36941 435 aa10.81□□□□□ -0.68
HMGB3P14-201ENST00000494195 DCP1AQ9NPI6 582 aaPredicted RBP10.81□□□□□ -0.68
HMGB3P14-201ENST00000494195 GULP1Q9UBP9 304 aa10.81□□□□□ -0.68
HMGB3P14-201ENST00000494195 MPOP05164 745 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 TACR1P25103 407 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 SCUBE1Q8IWY4 988 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 LZTR1Q8N653 840 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 CDC6Q99741 560 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 MTA3Q9BTC8 594 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 ZNF552Q9H707 407 aaPredicted RBP10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 RWDD3Q9Y3V2 267 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 NPFFR2Q9Y5X5 522 aa10.8□□□□□ -0.68
HMGB3P14-201ENST00000494195 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 SDHBP21912 280 aa10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 ZC3H12BQ5HYM0 836 aaKnown RBP10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 BICRALQ6AI39 1079 aa10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 OGFOD2Q6N063 350 aa10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 USP53Q70EK8 1073 aa10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 JMYQ8N9B5 988 aa10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 DPF3Q92784 378 aa10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 IPO9Q96P70 1041 aaKnown RBP10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 TIMM13Q9Y5L4 95 aaPredicted RBP10.79□□□□□ -0.68
HMGB3P14-201ENST00000494195 TRBV23-1A0A0A0MS06 115 aa10.78□□□□□ -0.68
HMGB3P14-201ENST00000494195 SRGAP3O43295 1099 aa10.78□□□□□ -0.68
HMGB3P14-201ENST00000494195 MYO1BO43795 1136 aa10.78□□□□□ -0.68
HMGB3P14-201ENST00000494195 RPL11P62913 178 aaKnown RBP10.78□□□□□ -0.68
HMGB3P14-201ENST00000494195 RCBTB1Q8NDN9 531 aa10.78□□□□□ -0.68
HMGB3P14-201ENST00000494195 THAP3Q8WTV1 239 aaPredicted RBP10.78□□□□□ -0.68
HMGB3P14-201ENST00000494195 HRKO00198 91 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 GTF2A2P52657 109 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 NTRK3Q16288 839 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 FOXB2Q5VYV0 432 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 ZNF605Q86T29 641 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 CABP7Q86V35 215 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 LILRB2Q8N423 598 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 FBXO15Q8NCQ5 510 aaPredicted RBP10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 PIF1Q9H611 641 aa10.77□□□□□ -0.69
HMGB3P14-201ENST00000494195 ABLIM1O14639 778 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 FARP2O94887 1054 aaPredicted RBP10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 CYBBP04839 570 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 DBHP09172 617 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 LCP1P13796 627 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 SUMO1P63165 101 aaKnown RBP10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 YBX1P67809 324 aaKnown RBP10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 TMEM62Q0P6H9 643 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 NR1I3Q14994 352 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 RAB3GAP1Q15042 981 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 C2orf27AQ580R0 203 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 RSPO2Q6UXX9 243 aaPredicted RBP10.76□□□□□ -0.69
HMGB3P14-201ENST00000494195 POU5F2Q8N7G0 328 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms