RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SPATA1Q5VX52 437 aa12.52□□□□□ -0.4
SMPD4-218ENST00000482171 CCPG1Q9ULG6 757 aa12.52□□□□□ -0.4
SMPD4-218ENST00000482171 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-218ENST00000482171 PODNQ7Z5L7 613 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 FMR1NBQ8N0W7 255 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-218ENST00000482171 CCDC114Q96M63 670 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 MORC2Q9Y6X9 1032 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-218ENST00000482171 CNTNAP4Q9C0A0 1308 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 TMEM110-MUSTN1A8MSY1 372 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 GCOM1H8Y6P7 765 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-218ENST00000482171 POLR2MP0CAP2 368 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.41
SMPD4-218ENST00000482171 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
SMPD4-218ENST00000482171 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-218ENST00000482171 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 ZNF512BQ96KM6 892 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-218ENST00000482171 NT5C3AQ9H0P0 336 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 EPC1Q9H2F5 836 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
SMPD4-218ENST00000482171 DAGLAQ9Y4D2 1042 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 WDR19Q8NEZ3 1342 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 LIG3P49916 1009 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 GSDMAQ96QA5 445 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 POLD4Q9HCU8 107 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 FRMD4BQ9Y2L6 1034 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 PLCG1P19174 1290 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-218ENST00000482171 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-218ENST00000482171 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 GJC1P36383 396 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 VAV2P52735 878 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 FAM26FQ5R3K3 315 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 SHC4Q6S5L8 630 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 CCDC121Q6ZUS5 278 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 RRAGAQ7L523 313 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 MYOCDQ8IZQ8 938 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
SMPD4-218ENST00000482171 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 EXOC3O60645 756 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 PPP1R2P41236 205 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 CYP26C1Q6V0L0 522 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 ADGRA1Q86SQ6 560 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 ANKRD7Q92527 254 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 PAGE5Q96GU1 130 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 PARD6BQ9BYG5 372 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 RGPD8O14715 1765 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-218ENST00000482171 GOLGA6BA6NDN3 693 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 FGFR2P21802 821 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 ACTN2P35609 894 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 LARP4BQ92615 738 aaKnown RBP12.5□□□□□ -0.41
SMPD4-218ENST00000482171 MPHOSPH6Q99547 160 aaKnown RBP12.5□□□□□ -0.41
SMPD4-218ENST00000482171 PANK4Q9NVE7 773 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 GYS1P13807 737 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 CYP2J2P51589 502 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 RESP18Q5W5W9 173 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 USP49Q70CQ1 688 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 MIER3Q7Z3K6 550 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 GJA10Q969M2 543 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 FAN1Q9Y2M0 1017 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-218ENST00000482171 MRPL11Q9Y3B7 192 aaKnown RBP12.5□□□□□ -0.41
SMPD4-218ENST00000482171 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
SMPD4-218ENST00000482171 POTEMA6NI47 508 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 MYO1CO00159 1063 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 EZRP15311 586 aaKnown RBP12.49□□□□□ -0.41
SMPD4-218ENST00000482171 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-218ENST00000482171 BIRC3Q13489 604 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 SARM1Q6SZW1 724 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 SND1Q7KZF4 910 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMPD4-218ENST00000482171 KCNB2Q92953 911 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 PIK3C2AO00443 1686 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 EEF2P13639 858 aaKnown RBP12.49□□□□□ -0.41
SMPD4-218ENST00000482171 TTBK2Q6IQ55 1244 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 ORC4O43929 436 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 CASP14P31944 242 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 E2F4Q16254 413 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 TMTC1Q8IUR5 882 aa12.49□□□□□ -0.41
SMPD4-218ENST00000482171 TNS2Q63HR2 1409 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms