RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 SYTL5Q8TDW5 730 aaPredicted RBP14.19□□□□□ -0.14
PTPRF-213ENST00000481019 BRF1Q92994 677 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 SPZ1Q9BXG8 430 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 RBM19Q9Y4C8 960 aaKnown RBP14.19□□□□□ -0.14
PTPRF-213ENST00000481019 PDE4DIPQ5VU43 2346 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 ALPK3Q96L96 1907 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 PNMA6FA0A0J9YX94 578 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.18□□□□□ -0.14
PTPRF-213ENST00000481019 ZBTB43O43298 467 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 ALDH5A1P51649 535 aaPredicted RBP14.18□□□□□ -0.14
PTPRF-213ENST00000481019 ACVR2BQ13705 512 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 RUFY3Q7L099 469 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 MSL3Q8N5Y2 521 aaKnown RBP14.18□□□□□ -0.14
PTPRF-213ENST00000481019 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 PAWRQ96IZ0 340 aaKnown RBP14.18□□□□□ -0.14
PTPRF-213ENST00000481019 TAAR1Q96RJ0 339 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 AMNQ9BXJ7 453 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 C22orf23Q9BZE7 217 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 PDGFCQ9NRA1 345 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 ZHX1Q9UKY1 873 aaPredicted RBP14.18□□□□□ -0.14
PTPRF-213ENST00000481019 PCDHA1Q9Y5I3 950 aa14.18□□□□□ -0.14
PTPRF-213ENST00000481019 CNTNAP5Q8WYK1 1306 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 GOLGA8AA7E2F4 631 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 GOLGA8BA8MQT2 603 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 CALM1P0DP23 149 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 CALM2P0DP24 149 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 CALM3P0DP25 149 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 HOXA13P31271 388 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-213ENST00000481019 KIF5BP33176 963 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 ADD1P35611 737 aaKnown RBP14.17□□□□□ -0.14
PTPRF-213ENST00000481019 EEPD1Q7L9B9 569 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 FBXO16Q8IX29 292 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-213ENST00000481019 MORC4Q8TE76 937 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 TM6SF1Q9BZW5 370 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 PCDH10Q9P2E7 1040 aa14.17□□□□□ -0.14
PTPRF-213ENST00000481019 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-213ENST00000481019 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
PTPRF-213ENST00000481019 MYADML2A6NDP7 307 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 PSMA5P28066 241 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 SMARCA1P28370 1054 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 HSD17B4P51659 736 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 RTN1Q16799 776 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 CCDC144BQ3MJ40 725 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 GJC2Q5T442 439 aaPredicted RBP14.16□□□□□ -0.14
PTPRF-213ENST00000481019 TAPT1Q6NXT6 567 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 FBXL16Q8N461 479 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
PTPRF-213ENST00000481019 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 NRBP1Q9UHY1 535 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 PNMA2Q9UL42 364 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 CNPY2Q9Y2B0 182 aa14.16□□□□□ -0.14
PTPRF-213ENST00000481019 NID2Q14112 1375 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 ASB14A6NK59 587 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 DTNBO60941 627 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 PPFIA3O75145 1194 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 PGK1P00558 417 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 CFBP00751 764 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 COL6A1P12109 1028 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 EDNRBP24530 442 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
PTPRF-213ENST00000481019 ADCYAP1R1P41586 468 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 GNAQP50148 359 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 FGD1P98174 961 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 GHRHRQ02643 423 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 SYNE3Q6ZMZ3 975 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 GPKOWQ92917 476 aaPredicted RBP eCLIP14.15□□□□□ -0.14
PTPRF-213ENST00000481019 IL17RAQ96F46 866 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 TBC1D32Q96NH3 1257 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 ABHD16BQ9H3Z7 469 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 NCOA5Q9HCD5 579 aaKnown RBP14.15□□□□□ -0.14
PTPRF-213ENST00000481019 CYP46A1Q9Y6A2 500 aa14.15□□□□□ -0.14
PTPRF-213ENST00000481019 CTAGE5O15320 804 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 AKR1A1P14550 325 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 SMPD1P17405 629 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 RBM25P49756 843 aaKnown RBP14.14□□□□□ -0.15
PTPRF-213ENST00000481019 EVCP57679 992 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 LRRC41Q15345 812 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 ANKLE1Q8NAG6 615 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 IL31RAQ8NI17 732 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 XPNPEP3Q9NQH7 507 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 FAM184BQ9ULE4 1060 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 SYNRGQ9UMZ2 1314 aa14.14□□□□□ -0.15
PTPRF-213ENST00000481019 CEP290O15078 2479 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 ADAMTS3O15072 1205 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 MSCO60682 206 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 ADAMTS4O75173 837 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 EIF2AK2P19525 551 aaKnown RBP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 METAP2P50579 478 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 CCT2P78371 535 aaKnown RBP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 NTRK3Q16288 839 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 WWC2Q6AWC2 1192 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 MCF2L2Q86YR7 1114 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 DNERQ8NFT8 737 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 ZFP91Q96JP5 570 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 RMDN3Q96TC7 470 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 C11orf49Q9H6J7 331 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 305 ms