RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TCF20Q9UGU0 1960 aaKnown RBP19.1■□□□□ 0.65
DDX56-210ENST00000479440 CHD7Q9P2D1 2997 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 XIRP2A4UGR9 3374 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 LOC102724159A0A0B4J2E5 919 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 RFXAPO00287 272 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 PITPNM1O00562 1244 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 PURAQ00577 322 aaKnown RBP19.1■□□□□ 0.65
DDX56-210ENST00000479440 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
DDX56-210ENST00000479440 PWP2Q15269 919 aaKnown RBP19.1■□□□□ 0.65
DDX56-210ENST00000479440 BRDTQ58F21 947 aaPredicted RBP19.1■□□□□ 0.65
DDX56-210ENST00000479440 NSMFQ6X4W1 530 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 MORC4Q8TE76 937 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 MTG1Q9BT17 334 aaPredicted RBP19.1■□□□□ 0.65
DDX56-210ENST00000479440 ADD3Q9UEY8 706 aaKnown RBP19.1■□□□□ 0.65
DDX56-210ENST00000479440 CCPG1Q9ULG6 757 aa19.1■□□□□ 0.65
DDX56-210ENST00000479440 COL4A4P53420 1690 aaPredicted RBP19.09■□□□□ 0.65
DDX56-210ENST00000479440 EPOPA6NHQ4 379 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 RNF113AO15541 343 aaKnown RBP19.09■□□□□ 0.65
DDX56-210ENST00000479440 BAIAP3O94812 1187 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 MYL3P08590 195 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 LRRFIP1Q32MZ4 808 aaKnown RBP19.09■□□□□ 0.65
DDX56-210ENST00000479440 MUM1L1Q5H9M0 696 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 FAM47CQ5HY64 1035 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 HERC6Q8IVU3 1022 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 RETREG2Q8NC44 543 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 OR6J1Q8NGC5 347 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 EPHX3Q9H6B9 360 aa19.09■□□□□ 0.65
DDX56-210ENST00000479440 DDX49Q9Y6V7 483 aaKnown RBP19.09■□□□□ 0.65
DDX56-210ENST00000479440 TLL1O43897 1013 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 MCCP23508 829 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 TFAP4Q01664 338 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 TAP1Q03518 808 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 TMEM63BQ5T3F8 832 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 IFNL3Q8IZI9 196 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 WDR11Q9BZH6 1224 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 FTOQ9C0B1 505 aaKnown RBP eCLIP19.08■□□□□ 0.64
DDX56-210ENST00000479440 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 MYO9BQ13459 2157 aa19.08■□□□□ 0.64
DDX56-210ENST00000479440 PATL2C9JE40 543 aaKnown RBP19.07■□□□□ 0.64
DDX56-210ENST00000479440 M0R2C6 588 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 ICAM1P05362 532 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 ALDH5A1P51649 535 aaPredicted RBP19.07■□□□□ 0.64
DDX56-210ENST00000479440 KRT40Q6A162 431 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 NFRKBQ6P4R8 1299 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 KCTD1Q719H9 257 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 MPHOSPH6Q99547 160 aaKnown RBP19.07■□□□□ 0.64
DDX56-210ENST00000479440 NAPBQ9H115 298 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 STX8Q9UNK0 236 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 NOD1Q9Y239 953 aa19.07■□□□□ 0.64
DDX56-210ENST00000479440 LCTP09848 1927 aa19.06■□□□□ 0.64
DDX56-210ENST00000479440 NKRFO15226 690 aaKnown RBP eCLIP19.06■□□□□ 0.64
DDX56-210ENST00000479440 IQCF3P0C7M6 154 aa19.06■□□□□ 0.64
DDX56-210ENST00000479440 KCNJ6P48051 423 aa19.06■□□□□ 0.64
DDX56-210ENST00000479440 PTPN11Q06124 597 aaPredicted RBP19.06■□□□□ 0.64
DDX56-210ENST00000479440 GRB10Q13322 594 aa19.06■□□□□ 0.64
DDX56-210ENST00000479440 BFSP2Q13515 415 aa19.06■□□□□ 0.64
DDX56-210ENST00000479440 RCSD1Q6JBY9 416 aa19.06■□□□□ 0.64
DDX56-210ENST00000479440 CCDC155Q8N6L0 562 aa19.06■□□□□ 0.64
DDX56-210ENST00000479440 TSPY2A6NKD2 308 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 SMARCA5O60264 1052 aaPredicted RBP19.05■□□□□ 0.64
DDX56-210ENST00000479440 KPNA6O60684 536 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 GPR37L1O60883 481 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 SNAP25P60880 206 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 PPARAQ07869 468 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 PPP2R5BQ15173 497 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 CCDC96Q2M329 555 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 CHMP4CQ96CF2 233 aa19.05■□□□□ 0.64
DDX56-210ENST00000479440 BDP1A6H8Y1 2624 aa19.04■□□□□ 0.64
DDX56-210ENST00000479440 RBM47A0AV96 593 aaKnown RBP19.04■□□□□ 0.64
DDX56-210ENST00000479440 ARHGEF15O94989 841 aa19.04■□□□□ 0.64
DDX56-210ENST00000479440 BAATQ14032 418 aaPredicted RBP19.04■□□□□ 0.64
DDX56-210ENST00000479440 SCN5AQ14524 2016 aa19.04■□□□□ 0.64
DDX56-210ENST00000479440 NBPF20Q3BBV1 942 aa19.04■□□□□ 0.64
DDX56-210ENST00000479440 DCAF4Q8WV16 495 aa19.04■□□□□ 0.64
DDX56-210ENST00000479440 PURBQ96QR8 312 aaKnown RBP19.04■□□□□ 0.64
DDX56-210ENST00000479440 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
DDX56-210ENST00000479440 LMCD1Q9NZU5 365 aa19.04■□□□□ 0.64
DDX56-210ENST00000479440 NCOR1O75376 2440 aa19.04■□□□□ 0.64
DDX56-210ENST00000479440 PTPDC1A2A3K4 754 aa19.03■□□□□ 0.64
DDX56-210ENST00000479440 CAGE1Q8TC20 777 aa19.03■□□□□ 0.64
DDX56-210ENST00000479440 SCN10AQ9Y5Y9 1956 aa19.02■□□□□ 0.64
DDX56-210ENST00000479440 PDE4DQ08499 809 aa19.02■□□□□ 0.64
DDX56-210ENST00000479440 GDPD5Q8WTR4 605 aa19.02■□□□□ 0.64
DDX56-210ENST00000479440 SCFD2Q8WU76 684 aa19.02■□□□□ 0.64
DDX56-210ENST00000479440 PNMA2Q9UL42 364 aa19.02■□□□□ 0.64
DDX56-210ENST00000479440 MTMR7Q9Y216 660 aa19.02■□□□□ 0.64
DDX56-210ENST00000479440 PRRC2BQ5JSZ5 2229 aaKnown RBP19.02■□□□□ 0.64
DDX56-210ENST00000479440 FAM86C2PA6NEL3 165 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 NFIBO00712 420 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 SLC30A10Q6XR72 485 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 RASGRP2Q7LDG7 609 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 AFAP1L1Q8TED9 768 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 ZBED2Q9BTP6 218 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 C11orf16Q9NQ32 467 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 REV3LO60673 3130 aa19.01■□□□□ 0.63
DDX56-210ENST00000479440 A6NJR5 290 aa19■□□□□ 0.63
DDX56-210ENST00000479440 B4DLN1 442 aa19■□□□□ 0.63
DDX56-210ENST00000479440 PI4K2BG5E9Z4 385 aa19■□□□□ 0.63
DDX56-210ENST00000479440 LPXNO60711 386 aa19■□□□□ 0.63
DDX56-210ENST00000479440 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms