RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 WHRNQ9P202 907 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 SUSD2Q9UGT4 822 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 DIS3Q9Y2L1 958 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 RWDD3Q9Y3V2 267 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 IRS2Q9Y4H2 1338 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 FFAR3O14843 346 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 CELA3BP08861 270 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 KCNC1P48547 511 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 EIF6P56537 245 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 PPP2R5EQ16537 467 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 EEF1DP3Q658K8 133 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 PRRT2Q7Z6L0 340 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 ZNF654Q8IZM8 581 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 ADGRG2Q8IZP9 1017 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 ALG3Q92685 438 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 BCAS3Q9H6U6 928 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 SUGT1Q9Y2Z0 365 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 SLC12A7Q9Y666 1083 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 PMF1-BGLAPU3KQ54 211 aa6.38□□□□□ -1.39
CDC42BPA-212ENST00000478573 A0A087WZG4 1122 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 A0A1B0GTL3 188 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 PPM1BO75688 479 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 EPHX1P07099 455 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 ATF2P15336 505 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 MC3RP41968 323 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 SEPHS1P49903 392 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 SLURP1P55000 103 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 FOXO4P98177 505 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 SLC7A5Q01650 507 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 COL9A2Q14055 689 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 SKOR2Q2VWA4 1001 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 CPNE8Q86YQ8 564 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 MCMBPQ9BTE3 642 aa6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 PHAXQ9H814 394 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-212ENST00000478573 AURKAO14965 403 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 IGSF3O75054 1194 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 NCAM1P13591 858 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 NAALADL2Q58DX5 795 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 RCSD1Q6JBY9 416 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 LZTR1Q8N653 840 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 USP33Q8TEY7 942 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 FNIP1Q8TF40 1166 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 TEPSINQ96N21 525 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 KLHL25Q9H0H3 589 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 USP40Q9NVE5 1235 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 GULP1Q9UBP9 304 aa6.36□□□□□ -1.39
CDC42BPA-212ENST00000478573 A0A1W2PQH9 124 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 C2orf71A6NGG8 1288 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 ASGR2P07307 311 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 GLI4P10075 376 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 FBLN1P23142 703 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 AMPD2Q01433 879 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 GPRASP2Q96D09 838 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 SPATA25Q9BR10 227 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 TINF2Q9BSI4 451 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 RNF38Q9H0F5 515 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 CCSER2Q9H7U1 834 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 CGGBP1Q9UFW8 167 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 BACE2Q9Y5Z0 518 aa6.35□□□□□ -1.39
CDC42BPA-212ENST00000478573 PMLP29590 882 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 SOX9P48436 509 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 GIPRP48546 466 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 VWA3BQ502W6 1294 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 FRMD5Q7Z6J6 570 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 SLC43A3Q8NBI5 491 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 NLGN2Q8NFZ4 835 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 ZNF526Q8TF50 670 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 CPLX3Q8WVH0 158 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 SPATA32Q96LK8 384 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 FBLN5Q9UBX5 448 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 NUDT5Q9UKK9 219 aa6.34□□□□□ -1.39
CDC42BPA-212ENST00000478573 NPHP3-ACAD11A0A0J9YXS1 232 aa6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 PAMP19021 973 aa6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 NASPP49321 788 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 PLP2Q04941 152 aa6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 RTP5Q14D33 572 aa6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 NT5DC1Q5TFE4 455 aa6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 LIPIQ6XZB0 460 aa6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 OR6P1Q8NGX9 317 aa6.33□□□□□ -1.4
CDC42BPA-212ENST00000478573 CAP1Q01518 475 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 SF3A1Q15459 793 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 UBXN11Q5T124 520 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 KIAA1211LQ6NV74 962 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 C19orf47Q8N9M1 422 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 KLHL6Q8WZ60 621 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 PEX11GQ96HA9 241 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 ACBD3Q9H3P7 528 aa6.32□□□□□ -1.4
CDC42BPA-212ENST00000478573 PRICKLE3O43900 615 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 WWC2Q6AWC2 1192 aa6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 VHLLQ6RSH7 139 aa6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 B3GNT8Q7Z7M8 397 aa6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 SAPCD2Q86UD0 394 aa6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 FERMT3Q86UX7 667 aa6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 PPP1R14AQ96A00 147 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms