RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 CCDC42Q96M95 316 aa8.82□□□□□ -1
TPM3-215ENST00000469717 KRT12Q99456 494 aa8.82□□□□□ -1
TPM3-215ENST00000469717 TUBGCP2Q9BSJ2 902 aa8.82□□□□□ -1
TPM3-215ENST00000469717 GOLPH3Q9H4A6 298 aa8.82□□□□□ -1
TPM3-215ENST00000469717 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.82□□□□□ -1
TPM3-215ENST00000469717 PLAAQ9Y263 795 aa8.82□□□□□ -1
TPM3-215ENST00000469717 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
TPM3-215ENST00000469717 ANO9A1A5B4 782 aa8.81□□□□□ -1
TPM3-215ENST00000469717 PHF20L1A8MW92 1017 aa8.81□□□□□ -1
TPM3-215ENST00000469717 FTCDO95954 541 aa8.81□□□□□ -1
TPM3-215ENST00000469717 ITGB3BPQ13352 177 aaPredicted RBP8.81□□□□□ -1
TPM3-215ENST00000469717 TTC38Q5R3I4 469 aa8.81□□□□□ -1
TPM3-215ENST00000469717 ZNF658Q5TYW1 1059 aaPredicted RBP8.81□□□□□ -1
TPM3-215ENST00000469717 EMBQ6PCB8 327 aa8.81□□□□□ -1
TPM3-215ENST00000469717 CCDC121Q6ZUS5 278 aa8.81□□□□□ -1
TPM3-215ENST00000469717 STAG1Q8WVM7 1258 aa8.81□□□□□ -1
TPM3-215ENST00000469717 TLR10Q9BXR5 811 aa8.81□□□□□ -1
TPM3-215ENST00000469717 CNOT8Q9UFF9 292 aaKnown RBP8.81□□□□□ -1
TPM3-215ENST00000469717 L3MBTL1Q9Y468 752 aa8.81□□□□□ -1
TPM3-215ENST00000469717 FAM107AO95990 144 aa8.81□□□□□ -1
TPM3-215ENST00000469717 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
TPM3-215ENST00000469717 LIFRP42702 1097 aa8.81□□□□□ -1
TPM3-215ENST00000469717 EVX2Q03828 476 aa8.81□□□□□ -1
TPM3-215ENST00000469717 SPAG1Q07617 926 aa8.81□□□□□ -1
TPM3-215ENST00000469717 BYSLQ13895 437 aaKnown RBP8.81□□□□□ -1
TPM3-215ENST00000469717 NBPF9Q3BBW0 867 aa8.81□□□□□ -1
TPM3-215ENST00000469717 METTL24Q5JXM2 366 aa8.81□□□□□ -1
TPM3-215ENST00000469717 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
TPM3-215ENST00000469717 RASGRP4Q8TDF6 673 aa8.81□□□□□ -1
TPM3-215ENST00000469717 SH2D4AQ9H788 454 aa8.81□□□□□ -1
TPM3-215ENST00000469717 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
TPM3-215ENST00000469717 PHKG2P15735 406 aa8.81□□□□□ -1
TPM3-215ENST00000469717 RASSF7Q02833 373 aa8.81□□□□□ -1
TPM3-215ENST00000469717 GFPT1Q06210 699 aaPredicted RBP8.81□□□□□ -1
TPM3-215ENST00000469717 BIRC2Q13490 618 aa8.81□□□□□ -1
TPM3-215ENST00000469717 NPY5RQ15761 445 aa8.81□□□□□ -1
TPM3-215ENST00000469717 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
TPM3-215ENST00000469717 ALS2CLQ60I27 953 aa8.81□□□□□ -1
TPM3-215ENST00000469717 KLHL7Q8IXQ5 586 aa8.81□□□□□ -1
TPM3-215ENST00000469717 TEX11Q8IYF3 940 aa8.81□□□□□ -1
TPM3-215ENST00000469717 MAGEB6Q8N7X4 407 aa8.81□□□□□ -1
TPM3-215ENST00000469717 WASF1Q92558 559 aa8.81□□□□□ -1
TPM3-215ENST00000469717 STAMBPL1Q96FJ0 436 aa8.81□□□□□ -1
TPM3-215ENST00000469717 ATP6V1G3Q96LB4 118 aa8.81□□□□□ -1
TPM3-215ENST00000469717 QTRT2Q9H974 415 aaKnown RBP8.81□□□□□ -1
TPM3-215ENST00000469717 BAIAP2L1Q9UHR4 511 aa8.81□□□□□ -1
TPM3-215ENST00000469717 PCDHA13Q9Y5I0 950 aa8.81□□□□□ -1
TPM3-215ENST00000469717 PDS5AQ29RF7 1337 aaKnown RBP8.81□□□□□ -1
TPM3-215ENST00000469717 LAMB4A4D0S4 1761 aa8.8□□□□□ -1
TPM3-215ENST00000469717 CYP2D7A0A087X1C5 515 aa8.8□□□□□ -1
TPM3-215ENST00000469717 MYBL1P10243 752 aa8.8□□□□□ -1
TPM3-215ENST00000469717 INHBEP58166 350 aa8.8□□□□□ -1
TPM3-215ENST00000469717 AKNAD1Q5T1N1 836 aa8.8□□□□□ -1
TPM3-215ENST00000469717 MFSD6Q6ZSS7 791 aa8.8□□□□□ -1
TPM3-215ENST00000469717 ADSSL1Q8N142 457 aa8.8□□□□□ -1
TPM3-215ENST00000469717 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
TPM3-215ENST00000469717 RNF217Q8TC41 542 aa8.8□□□□□ -1
TPM3-215ENST00000469717 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.8□□□□□ -1
TPM3-215ENST00000469717 CNNM1Q9NRU3 951 aa8.8□□□□□ -1
TPM3-215ENST00000469717 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
TPM3-215ENST00000469717 UBR1Q8IWV7 1749 aa8.8□□□□□ -1
TPM3-215ENST00000469717 TACC1O75410 805 aa8.8□□□□□ -1
TPM3-215ENST00000469717 KRT2P35908 639 aa8.8□□□□□ -1
TPM3-215ENST00000469717 KIF11P52732 1056 aa8.8□□□□□ -1
TPM3-215ENST00000469717 SPA17Q15506 151 aa8.8□□□□□ -1
TPM3-215ENST00000469717 ANKRD20A8PQ5CZ79 823 aa8.8□□□□□ -1
TPM3-215ENST00000469717 CC2D2BQ6DHV5 1058 aa8.8□□□□□ -1
TPM3-215ENST00000469717 FNBP4Q8N3X1 1017 aaPredicted RBP8.8□□□□□ -1
TPM3-215ENST00000469717 CSGALNACT2Q8N6G5 542 aa8.8□□□□□ -1
TPM3-215ENST00000469717 TRIM58Q8NG06 486 aa8.8□□□□□ -1
TPM3-215ENST00000469717 MDM1Q8TC05 714 aa8.8□□□□□ -1
TPM3-215ENST00000469717 CAVIN3Q969G5 261 aa8.8□□□□□ -1
TPM3-215ENST00000469717 DUSP9Q99956 384 aaKnown RBP8.8□□□□□ -1
TPM3-215ENST00000469717 RBM28Q9NW13 759 aaKnown RBP8.8□□□□□ -1
TPM3-215ENST00000469717 ZNHIT6Q9NWK9 470 aaKnown RBP8.8□□□□□ -1
TPM3-215ENST00000469717 MINDY4BA8MYZ0 360 aa8.8□□□□□ -1
TPM3-215ENST00000469717 MAFGO15525 162 aa8.8□□□□□ -1
TPM3-215ENST00000469717 CYP27B1O15528 508 aa8.8□□□□□ -1
TPM3-215ENST00000469717 GTPBP6O43824 516 aaPredicted RBP8.8□□□□□ -1
TPM3-215ENST00000469717 RAD21O60216 631 aa8.8□□□□□ -1
TPM3-215ENST00000469717 SRGNP10124 158 aa8.8□□□□□ -1
TPM3-215ENST00000469717 HSPA1LP34931 641 aa8.8□□□□□ -1
TPM3-215ENST00000469717 FLT3P36888 993 aa8.8□□□□□ -1
TPM3-215ENST00000469717 SLC1A4P43007 532 aa8.8□□□□□ -1
TPM3-215ENST00000469717 SCTRP47872 440 aa8.8□□□□□ -1
TPM3-215ENST00000469717 IQCEQ6IPM2 695 aa8.8□□□□□ -1
TPM3-215ENST00000469717 MICALCLQ6ZW33 695 aa8.8□□□□□ -1
TPM3-215ENST00000469717 LCORLQ8N3X6 602 aa8.8□□□□□ -1
TPM3-215ENST00000469717 RASSF8Q8NHQ8 419 aa8.8□□□□□ -1
TPM3-215ENST00000469717 EXOC1Q9NV70 894 aa8.8□□□□□ -1
TPM3-215ENST00000469717 TRMT112Q9UI30 125 aaKnown RBP8.8□□□□□ -1
TPM3-215ENST00000469717 GGT7Q9UJ14 662 aa8.8□□□□□ -1
TPM3-215ENST00000469717 RIPOR2Q9Y4F9 1068 aa8.8□□□□□ -1
TPM3-215ENST00000469717 AKAP11Q9UKA4 1901 aa8.8□□□□□ -1
TPM3-215ENST00000469717 TCRBV5S4A2TA0A5A2 114 aa8.79□□□□□ -1
TPM3-215ENST00000469717 GSG1L2A8MUP6 293 aa8.79□□□□□ -1
TPM3-215ENST00000469717 RTN2O75298 545 aa8.79□□□□□ -1
TPM3-215ENST00000469717 MYO1EQ12965 1108 aa8.79□□□□□ -1
TPM3-215ENST00000469717 HLTFQ14527 1009 aaKnown RBP eCLIP8.79□□□□□ -1
TPM3-215ENST00000469717 NAALADL2Q58DX5 795 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms