RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CTU1Q7Z7A3 348 aaKnown RBP18.42■□□□□ 0.54
GPC1-207ENST00000466624 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
GPC1-207ENST00000466624 INTS4Q96HW7 963 aaKnown RBP18.42■□□□□ 0.54
GPC1-207ENST00000466624 SLC5A4Q9NY91 659 aa18.42■□□□□ 0.54
GPC1-207ENST00000466624 DIS3Q9Y2L1 958 aaKnown RBP18.42■□□□□ 0.54
GPC1-207ENST00000466624 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
GPC1-207ENST00000466624 XRCC5P13010 732 aaKnown RBP18.41■□□□□ 0.54
GPC1-207ENST00000466624 XBP1P17861 261 aa18.41■□□□□ 0.54
GPC1-207ENST00000466624 PRKCZQ05513 592 aa18.41■□□□□ 0.54
GPC1-207ENST00000466624 APBA2Q99767 749 aa18.41■□□□□ 0.54
GPC1-207ENST00000466624 ZMYND12Q9H0C1 365 aa18.41■□□□□ 0.54
GPC1-207ENST00000466624 TRIM17Q9Y577 477 aa18.41■□□□□ 0.54
GPC1-207ENST00000466624 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
GPC1-207ENST00000466624 ECM2O94769 699 aaPredicted RBP18.4■□□□□ 0.54
GPC1-207ENST00000466624 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 FLT3LGP49771 235 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 RPS6P62753 249 aaKnown RBP18.4■□□□□ 0.54
GPC1-207ENST00000466624 BAATQ14032 418 aaPredicted RBP18.4■□□□□ 0.54
GPC1-207ENST00000466624 ZNF792Q3KQV3 632 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 CUL5Q93034 780 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 ALG1Q9BT22 464 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 PSTPIP2Q9H939 334 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 RIC8AQ9NPQ8 531 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 GABRQQ9UN88 632 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
GPC1-207ENST00000466624 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 SMCO2A6NFE2 343 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 POTEB2H3BUK9 544 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 COBLO75128 1261 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 CFBP00751 764 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 GNA11P29992 359 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 ADCY7P51828 1080 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 MRPL12P52815 198 aaKnown RBP18.39■□□□□ 0.53
GPC1-207ENST00000466624 PWP2Q15269 919 aaKnown RBP18.39■□□□□ 0.53
GPC1-207ENST00000466624 PKN2Q16513 984 aaKnown RBP18.39■□□□□ 0.53
GPC1-207ENST00000466624 GALNT17Q6IS24 598 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 SLC30A10Q6XR72 485 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 ZNF467Q7Z7K2 595 aaPredicted RBP18.39■□□□□ 0.53
GPC1-207ENST00000466624 DPP9Q86TI2 863 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 TRMT44Q8IYL2 757 aaKnown RBP18.39■□□□□ 0.53
GPC1-207ENST00000466624 TBC1D5Q92609 795 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.53
GPC1-207ENST00000466624 MEIS2O14770 477 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 PGK2P07205 417 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 MSL3Q8N5Y2 521 aaKnown RBP18.38■□□□□ 0.53
GPC1-207ENST00000466624 FAM184AQ8NB25 1140 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 DNERQ8NFT8 737 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 SYTL5Q8TDW5 730 aaPredicted RBP18.38■□□□□ 0.53
GPC1-207ENST00000466624 PXYLP1Q8TE99 480 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 SHISA4Q96DD7 197 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 ADD3Q9UEY8 706 aaKnown RBP18.38■□□□□ 0.53
GPC1-207ENST00000466624 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
GPC1-207ENST00000466624 LRRC37A2A6NM11 1700 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 CYP2B6P20813 491 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 CALML3P27482 149 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 BECN1Q14457 450 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 OLFML2BQ68BL8 750 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 MCTP2Q6DN12 878 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 DAGLBQ8NCG7 672 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 NPLOC4Q8TAT6 608 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 RAET1EQ8TD07 263 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 PHF20Q9BVI0 1012 aa18.37■□□□□ 0.53
GPC1-207ENST00000466624 MCM3APO60318 1980 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 IGHA2P01877 340 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 GJB2P29033 226 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 CLK2P49760 499 aaKnown RBP18.36■□□□□ 0.53
GPC1-207ENST00000466624 NLRP5P59047 1200 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 CNTN2Q02246 1040 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 AP3B2Q13367 1082 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 MAMDC4Q6UXC1 1216 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 FGD4Q96M96 766 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 COL20A1Q9P218 1284 aa18.36■□□□□ 0.53
GPC1-207ENST00000466624 FRMPD4Q14CM0 1322 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 SOWAHBA6NEL2 793 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 DTNBO60941 627 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 FOSP01100 380 aaPredicted RBP18.35■□□□□ 0.53
GPC1-207ENST00000466624 HOXA13P31271 388 aaPredicted RBP18.35■□□□□ 0.53
GPC1-207ENST00000466624 TRIM29Q14134 588 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
GPC1-207ENST00000466624 USP17L6PQ6QN14 398 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 SLAIN1Q8ND83 568 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 MPHOSPH6Q99547 160 aaKnown RBP18.35■□□□□ 0.53
GPC1-207ENST00000466624 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 PTCH2Q9Y6C5 1203 aa18.35■□□□□ 0.53
GPC1-207ENST00000466624 ASTN1O14525 1302 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 SYNGAP1Q96PV0 1343 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 ASB14A6NK59 587 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 B4DLN1 442 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 ADCY3O60266 1144 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
GPC1-207ENST00000466624 NPY5RQ15761 445 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 REXO1Q8N1G1 1221 aaKnown RBP18.34■□□□□ 0.53
GPC1-207ENST00000466624 MORC4Q8TE76 937 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 NSUN6Q8TEA1 469 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms