RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 RPS6P62753 249 aaKnown RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 HMGN5P82970 282 aaKnown RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 SCRN1Q12765 414 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 BAATQ14032 418 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 PFKFB3Q16875 520 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 MUM1L1Q5H9M0 696 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 MCTP2Q6DN12 878 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 POTEEQ6S8J3 1075 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 ZNF467Q7Z7K2 595 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 HSCBQ8IWL3 235 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 TNS4Q8IZW8 715 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 FAM184AQ8NB25 1140 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 DNERQ8NFT8 737 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 GTF3C6Q969F1 213 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 LLPHQ9BRT6 129 aaKnown RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 TMEM106CQ9BVX2 250 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 MCOLN1Q9GZU1 580 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 NCOA5Q9HCD5 579 aaKnown RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 C6orf50Q9HD87 102 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 CYP39A1Q9NYL5 469 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 GJD2Q9UKL4 321 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 GABRQQ9UN88 632 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 HPS5Q9UPZ3 1129 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 SYNGAP1Q96PV0 1343 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 MSCO60682 206 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 FOSP01100 380 aaPredicted RBP7.33□□□□□ -1.24
SF3B1-206ENST00000462613 PGK2P07205 417 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 CAPN2P17655 700 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 CTGFP29279 349 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 ADCY7P51828 1080 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 PDE4DQ08499 809 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 ME3Q16798 604 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 ARHGEF16Q5VV41 709 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 OLFML2BQ68BL8 750 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 GALNT17Q6IS24 598 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 NSUN6Q8TEA1 469 aaKnown RBP7.33□□□□□ -1.24
SF3B1-206ENST00000462613 USP6NLQ92738 828 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 PHKBQ93100 1093 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 MAML3Q96JK9 1138 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 KIF2CQ99661 725 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 TINF2Q9BSI4 451 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 ABHD16BQ9H3Z7 469 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 PSTPIP2Q9H939 334 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 HMX1Q9NP08 348 aaPredicted RBP7.33□□□□□ -1.24
SF3B1-206ENST00000462613 SH3GLB2Q9NR46 395 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 BARHL2Q9NY43 387 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 ORC3Q9UBD5 711 aaPredicted RBP7.33□□□□□ -1.24
SF3B1-206ENST00000462613 NRBP1Q9UHY1 535 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 KAT6AQ92794 2004 aa7.33□□□□□ -1.24
SF3B1-206ENST00000462613 KIAA0100Q14667 2235 aaKnown RBP7.32□□□□□ -1.24
SF3B1-206ENST00000462613 RPTORQ8N122 1335 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 DNAJC25-GNG10A0A024R161 153 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 hCG_1642624A0A1W2PR95 340 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 ESYT2A0FGR8 921 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 SMCO2A6NFE2 343 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 PIK3CDO00329 1044 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 COBLO75128 1261 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 INHAP05111 366 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 PRKAR2AP13861 404 aaKnown RBP7.32□□□□□ -1.24
SF3B1-206ENST00000462613 ELNP15502 786 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 CNGA1P29973 690 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 ALDH5A1P51649 535 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-206ENST00000462613 HSD17B4P51659 736 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 NLRP5P59047 1200 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 SAFBQ15424 915 aaKnown RBP eCLIP7.32□□□□□ -1.24
SF3B1-206ENST00000462613 NTRK3Q16288 839 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 ZNF792Q3KQV3 632 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 COL13A1Q5TAT6 717 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-206ENST00000462613 WWC2Q6AWC2 1192 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 FCHSD1Q86WN1 690 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 CCDC83Q8IWF9 413 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 NECAB1Q8N987 351 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 FAM133AQ8N9E0 248 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 NPLOC4Q8TAT6 608 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 CLEC4DQ8WXI8 215 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 TRIB2Q92519 343 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 GPKOWQ92917 476 aaPredicted RBP eCLIP7.32□□□□□ -1.24
SF3B1-206ENST00000462613 IWS1Q96ST2 819 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 RMDN3Q96TC7 470 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 FAM217BQ9NTX9 383 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-206ENST00000462613 LRRC37A2A6NM11 1700 aa7.32□□□□□ -1.24
SF3B1-206ENST00000462613 MYH9P35579 1960 aaKnown RBP7.31□□□□□ -1.24
SF3B1-206ENST00000462613 STXBP3O00186 592 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 PPP1R11O60927 126 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-206ENST00000462613 STAM2O75886 525 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 CCND2P30279 289 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 HOXA13P31271 388 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-206ENST00000462613 CNTN2Q02246 1040 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 GHRHRQ02643 423 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 FUT2Q10981 343 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 AP3B2Q13367 1082 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 GNL2Q13823 731 aaKnown RBP7.31□□□□□ -1.24
SF3B1-206ENST00000462613 BECN1Q14457 450 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 STXBP2Q15833 593 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 GNPTABQ3T906 1256 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 MAMDC4Q6UXC1 1216 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 SLC30A10Q6XR72 485 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 ARMCX2Q7L311 632 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms