RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 ZBTB5O15062 677 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 DHX16O60231 1041 aaKnown RBP11.51□□□□□ -0.57
VPS45-204ENST00000460366 RXRAP19793 462 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 CTGFP29279 349 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 FUT2Q10981 343 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 NBR1Q14596 966 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 CDC37Q16543 378 aaPredicted RBP11.51□□□□□ -0.57
VPS45-204ENST00000460366 OTOP1Q7RTM1 612 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 GPR142Q7Z601 462 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
VPS45-204ENST00000460366 NBPF11Q86T75 865 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 NCAPG2Q86XI2 1143 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 RGS22Q8NE09 1264 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 SOCS4Q8WXH5 440 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 RRP36Q96EU6 259 aaKnown RBP11.51□□□□□ -0.57
VPS45-204ENST00000460366 AGBL1Q96MI9 1066 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 ARHGAP39Q9C0H5 1083 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 VAT1LQ9HCJ6 419 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 SRRDQ9UH36 339 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 GJD2Q9UKL4 321 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 CCPG1Q9ULG6 757 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 TPCN1Q9ULQ1 816 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
VPS45-204ENST00000460366 LIMCH1Q9UPQ0 1083 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 RIPK3Q9Y572 518 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 IVNS1ABPQ9Y6Y0 642 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
VPS45-204ENST00000460366 PFKFB2O60825 505 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 PLEKHA8P1O95397 391 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 FCER1AP12319 257 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 CDC27P30260 824 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 ADD1P35611 737 aaKnown RBP11.5□□□□□ -0.57
VPS45-204ENST00000460366 MCM2P49736 904 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 SNAP25P60880 206 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 CAP1Q01518 475 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 IRF5Q13568 498 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 GRB14Q14449 540 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 QRICH1Q2TAL8 776 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 MORN1Q5T089 497 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 C6orf132Q5T0Z8 1188 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 CCDC174Q6PII3 467 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 RAB11FIP4Q86YS3 637 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 SAMD3Q8N6K7 520 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 USP6NLQ92738 828 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 ZSCAN31Q96LW9 406 aaPredicted RBP11.5□□□□□ -0.57
VPS45-204ENST00000460366 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 AMNQ9BXJ7 453 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 SLKQ9H2G2 1235 aaPredicted RBP11.5□□□□□ -0.57
VPS45-204ENST00000460366 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
VPS45-204ENST00000460366 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
VPS45-204ENST00000460366 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 ABCB11O95342 1321 aa11.5□□□□□ -0.57
VPS45-204ENST00000460366 HOXC6P09630 235 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
VPS45-204ENST00000460366 ALAS1P13196 640 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 IFNAR1P17181 557 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 NTRK3Q16288 839 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 PROX2Q3B8N5 592 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 CPLX2Q6PUV4 134 aaKnown RBP11.49□□□□□ -0.57
VPS45-204ENST00000460366 TEX2Q8IWB9 1127 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 PIGSQ96S52 555 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 MMP19Q99542 508 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
VPS45-204ENST00000460366 RNF146Q9NTX7 359 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 SLC5A4Q9NY91 659 aa11.49□□□□□ -0.57
VPS45-204ENST00000460366 SEC63Q9UGP8 760 aaKnown RBP11.49□□□□□ -0.57
VPS45-204ENST00000460366 DIS3Q9Y2L1 958 aaKnown RBP11.49□□□□□ -0.57
VPS45-204ENST00000460366 MRPL11Q9Y3B7 192 aaKnown RBP11.49□□□□□ -0.57
VPS45-204ENST00000460366 CASP8AP2Q9UKL3 1982 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 PCNTO95613 3336 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 hCG_1984214I3L0E3 225 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 PRPF3O43395 683 aaKnown RBP11.48□□□□□ -0.57
VPS45-204ENST00000460366 CDKL5O76039 1030 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 RGS2P41220 211 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 FLT3LGP49771 235 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 CCT2P78371 535 aaKnown RBP11.48□□□□□ -0.57
VPS45-204ENST00000460366 MAP2K5Q13163 448 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 KCTD2Q14681 263 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 ME3Q16798 604 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 WDR78Q5VTH9 848 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 MCF2L2Q86YR7 1114 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 TRMT44Q8IYL2 757 aaKnown RBP11.48□□□□□ -0.57
VPS45-204ENST00000460366 ZNF713Q8N859 430 aaPredicted RBP11.48□□□□□ -0.57
VPS45-204ENST00000460366 CLEC4DQ8WXI8 215 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
VPS45-204ENST00000460366 MAP3K20Q9NYL2 800 aaKnown RBP11.48□□□□□ -0.57
VPS45-204ENST00000460366 PTPN22Q9Y2R2 807 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 PCDHA1Q9Y5I3 950 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 V9GY48 417 aaPredicted RBP11.48□□□□□ -0.57
VPS45-204ENST00000460366 CNTNAP5Q8WYK1 1306 aa11.48□□□□□ -0.57
VPS45-204ENST00000460366 PFASO15067 1338 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 DNAJC25-GNG10A0A024R161 153 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 GRXCR2A6NFK2 248 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms