RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 INF2Q27J81 1249 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 LETM2Q2VYF4 491 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 TTC31Q49AM3 519 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ERFEQ4G0M1 354 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC9C1Q4G0N8 1177 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 CFAP221Q4G0U5 840 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCDC40Q4G0X9 1142 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 VWA3BQ502W6 1294 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 DNAJC21Q5F1R6 531 aaKnown RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 KRT79Q5XKE5 535 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ALS2CLQ60I27 953 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 NCAPH2Q6IBW4 605 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 TTI2Q6NXR4 508 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 PPP1R18Q6NYC8 613 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 C8orf74Q6P047 294 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 INTS5Q6P9B9 1019 aaKnown RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 FOXR2Q6PJQ5 311 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 UNC13DQ70J99 1090 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZNF804AQ7Z570 1209 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 FBXO33Q7Z6M2 555 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 NEK8Q86SG6 692 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ADGRA1Q86SQ6 560 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 NBPF5PQ86XG9 351 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 POTEDQ86YR6 584 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 IFT20Q8IY31 132 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 EFCAB13Q8IY85 973 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 C10orf67Q8IYJ2 551 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 REXO1Q8N1G1 1221 aaKnown RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 PROM2Q8N271 834 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 MMGT1Q8N4V1 131 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 NOA1Q8NC60 698 aaKnown RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 NKX2-3Q8TAU0 364 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZNF507Q8TCN5 953 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ANKS1AQ92625 1134 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 GPKOWQ92917 476 aaPredicted RBP eCLIP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 FAM84BQ96KN1 310 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 NOX5Q96PH1 765 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRERF1Q96PN7 1200 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC4A9Q96Q91 983 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 MED15Q96RN5 788 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ERGIC2Q96RQ1 377 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 SELENOOQ9BVL4 669 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 SPZ1Q9BXG8 430 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRIM9Q9C026 710 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 TANGO6Q9C0B7 1094 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 GLT8D2Q9H1C3 349 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 SH2D4AQ9H788 454 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZCCHC17Q9NP64 241 aaKnown RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 RIC8AQ9NPQ8 531 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 KBTBD4Q9NVX7 518 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 RNF216Q9NWF9 866 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 LRWD1Q9UFC0 647 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 RSPH14Q9UHP6 348 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 FEZ2Q9UHY8 353 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 HPCAL4Q9UM19 191 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 SNX12Q9UMY4 172 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 MINPP1Q9UNW1 487 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 MAPK8IP1Q9UQF2 711 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 STK24Q9Y6E0 443 aa3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 COL1A1P02452 1464 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZNF831Q5JPB2 1677 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ROBO1Q9Y6N7 1651 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 A0A087WUV0 522 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SSU72P8A0A1W2PR75 194 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SMCO2A6NFE2 343 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 LRRIQ3A6PVS8 624 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SNAP23O00161 211 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 EBAG9O00559 213 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ENC1O14682 589 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 KLRC4O43908 158 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 NMT2O60551 498 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 COBLO75128 1261 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 PHACTR2O75167 634 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ERLIN2O94905 339 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 GCFC2P16383 781 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ANXA13P27216 316 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TNFRSF8P28908 595 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CDC25AP30304 524 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 HNRNPH3P31942 346 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 KIF11P52732 1056 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 GYS2P54840 703 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 C2orf54Q08AI8 447 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 IL17AQ16552 155 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ASPRV1Q53RT3 343 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TDRD12Q587J7 1177 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC10A5Q5PT55 438 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CFAP58Q5T655 872 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 C12orf60Q5U649 245 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SFMBT2Q5VUG0 894 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ANKRD40Q6AI12 368 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TYW1BQ6NUM6 668 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 PDXDC1Q6P996 788 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TPTE2Q6XPS3 522 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCNI2Q6ZMN8 369 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 PPP4R3CPQ6ZMV5 832 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 B4GALNT4Q76KP1 1039 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SND1Q7KZF4 910 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZNF572Q7Z3I7 529 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 VPS36Q86VN1 386 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 C2CD5Q86YS7 1000 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms