RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SLC4A7Q9Y6M7 1214 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 UBR5O95071 2799 aaPredicted RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 SPTA1P02549 2419 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 ZNF536O15090 1300 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 A0A1W2PRU2 124 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 WFS1O76024 890 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 ADRB1P08588 477 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 HSP90B1P14625 803 aaKnown RBP6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 ATP2A2P16615 1042 aaKnown RBP6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 PRKAR2BP31323 418 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 NFX1Q12986 1120 aaKnown RBP6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 MFSD14BQ5SR56 506 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 CCDC84Q86UT8 332 aaPredicted RBP6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 KIFC2Q96AC6 838 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 ANKRD2Q9GZV1 360 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 MYO7AQ13402 2215 aa6.82□□□□□ -1.32
SBDSP1-204ENST00000453858 TNKSO95271 1327 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 CELSR3Q9NYQ7 3312 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 TMEM229AB2RXF0 380 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 SPINT1O43278 529 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 WIPF1O43516 503 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 PCCAP05165 728 aaPredicted RBP6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 SLURP2P0DP57 97 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 HOXA7P31268 230 aaPredicted RBP6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 CYP2C18P33260 490 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 LTBRP36941 435 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 SMAD2Q15796 467 aaKnown RBP6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 RSPO4Q2I0M5 234 aaPredicted RBP6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 FAM47AQ5JRC9 791 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 MRPL14Q6P1L8 145 aaKnown RBP6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 ZFPM1Q8IX07 1006 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 KDF1Q8NAX2 398 aaPredicted RBP6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 TRAIPQ9BWF2 469 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 MTIF3Q9H2K0 278 aaKnown RBP6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 ETNK1Q9HBU6 452 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 PICK1Q9NRD5 415 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 KIAA1024Q9UPX6 916 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 LAMA1P25391 3075 aa6.81□□□□□ -1.32
SBDSP1-204ENST00000453858 U2SURPO15042 1029 aaKnown RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 PDGFBP01127 241 aaPredicted RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 PDIA4P13667 645 aaKnown RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 ATXN1P54253 815 aaKnown RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 ERVK-24P63145 666 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 RELBQ01201 579 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 ATP2B2Q01814 1243 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 SIGLEC14Q08ET2 396 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 COL9A3Q14050 684 aaPredicted RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 PRAMEF19Q5SWL8 479 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 CCSAPQ6IQ19 270 aaPredicted RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 RETREG2Q8NC44 543 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 CLP1Q92989 425 aaKnown RBP6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 CHAMP1Q96JM3 812 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 SUGCTQ9HAC7 445 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 ARHGEF10LQ9HCE6 1279 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 ZNF358Q9NW07 568 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 ZMIZ1Q9ULJ6 1067 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 HRH3Q9Y5N1 445 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 ABCA12Q86UK0 2595 aa6.8□□□□□ -1.32
SBDSP1-204ENST00000453858 SLC15A5A6NIM6 579 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 CDK2AP1O14519 115 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 CTNND1O60716 968 aaKnown RBP6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 CD4P01730 458 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 BMP2P12643 396 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 SMTNP53814 917 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 CTSWP56202 376 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 HERVK_113P62684 666 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 CHRNDQ07001 517 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 NFIAQ12857 509 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 SPP2Q13103 211 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 TMEM164Q5U3C3 297 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 KIAA0319Q5VV43 1072 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 OLFML2BQ68BL8 750 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 GDPD5Q8WTR4 605 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 AGBL1Q96MI9 1066 aa6.79□□□□□ -1.32
SBDSP1-204ENST00000453858 UMODL1Q5DID0 1318 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 LOC285556D6RIA3 1793 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 A6NJY4 79 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 SFI1A8K8P3 1242 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 MEN1O00255 615 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 TAF5LO75529 589 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 CNMDO75829 334 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 PGK1P00558 417 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 IL2RAP01589 272 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 ACLYP53396 1101 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 HMGCS2P54868 508 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 CENPCQ03188 943 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 TCP10Q12799 353 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 PABPC4Q13310 644 aaKnown RBP eCLIP6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 GRB14Q14449 540 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 TTLL4Q14679 1199 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 CBX2Q14781 532 aaPredicted RBP6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 LRSAM1Q6UWE0 723 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 ZNF804AQ7Z570 1209 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 FAM126BQ8IXS8 530 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms