RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SNCBQ16143 134 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 QPCTQ16769 361 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 FAM228AQ86W67 206 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 KRT12Q99456 494 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 DUSP9Q99956 384 aaKnown RBP15.48■□□□□ 0.07
VPS52-212ENST00000445902 TLR10Q9BXR5 811 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 THAP9Q9H5L6 903 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 PACSIN2Q9UNF0 486 aaPredicted RBP15.48■□□□□ 0.07
VPS52-212ENST00000445902 PLAAQ9Y263 795 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 NID2Q14112 1375 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 SOS2Q07890 1332 aaPredicted RBP15.48■□□□□ 0.07
VPS52-212ENST00000445902 A6NNZ2 444 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 DNM1LO00429 736 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 FAM107AO95990 144 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 TUBB8Q3ZCM7 444 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 TTI2Q6NXR4 508 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 CYB5D1Q6P9G0 228 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 YTHDF3Q7Z739 585 aaKnown RBP15.48■□□□□ 0.07
VPS52-212ENST00000445902 PARP9Q8IXQ6 854 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 TNFRSF25Q93038 417 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 HPS3Q969F9 1004 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 MTMR8Q96EF0 704 aa15.48■□□□□ 0.07
VPS52-212ENST00000445902 CYP2D7A0A087X1C5 515 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 CCDC189A1A4V9 331 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 NLRP5P59047 1200 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 TOM1L2Q6ZVM7 507 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 RASGRP4Q8TDF6 673 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 CASKIN2Q8WXE0 1202 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 PPP1R12BO60237 982 aaPredicted RBP15.47■□□□□ 0.07
VPS52-212ENST00000445902 GFPT1Q06210 699 aaPredicted RBP15.47■□□□□ 0.07
VPS52-212ENST00000445902 ITGB3BPQ13352 177 aaPredicted RBP15.47■□□□□ 0.07
VPS52-212ENST00000445902 ANKRD40Q6AI12 368 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
VPS52-212ENST00000445902 ENAHQ8N8S7 591 aaPredicted RBP15.47■□□□□ 0.07
VPS52-212ENST00000445902 OSBPL7Q9BZF2 842 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 NACAP1Q9BZK3 213 aa15.47■□□□□ 0.07
VPS52-212ENST00000445902 FTCDO95954 541 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 MAP3K12Q12852 859 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 PAK2Q13177 524 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 NAALADL2Q58DX5 795 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 CCDC178Q5BJE1 867 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 ZNF572Q7Z3I7 529 aaPredicted RBP15.46■□□□□ 0.07
VPS52-212ENST00000445902 FUKQ8N0W3 1084 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 SPATA5Q8NB90 893 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 NUP58Q9BVL2 599 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 MMRN2Q9H8L6 949 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 TPX2Q9ULW0 747 aaKnown RBP15.46■□□□□ 0.07
VPS52-212ENST00000445902 SKAP2O75563 359 aaPredicted RBP15.46■□□□□ 0.07
VPS52-212ENST00000445902 MAGEA1P43355 309 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 CLNS1AP54105 237 aaKnown RBP15.46■□□□□ 0.07
VPS52-212ENST00000445902 ITIH3Q06033 890 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 FUT2Q10981 343 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 RASGRF1Q13972 1273 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 HLTFQ14527 1009 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS52-212ENST00000445902 MIIPQ5JXC2 388 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 KLHL7Q8IXQ5 586 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.078e-7■□□□□ 10.9
VPS52-212ENST00000445902 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 DISC1Q9NRI5 854 aa15.46■□□□□ 0.07
VPS52-212ENST00000445902 GLI3P10071 1580 aa15.46■□□□□ 0.06
VPS52-212ENST00000445902 SEC23AQ15436 765 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 PTPROQ16827 1216 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 RRAGAQ7L523 313 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 IQSEC3Q9UPP2 1182 aaPredicted RBP15.45■□□□□ 0.06
VPS52-212ENST00000445902 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
VPS52-212ENST00000445902 KLRC4O43908 158 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 FCER1AP12319 257 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 SLC1A4P43007 532 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 CFAP221Q4G0U5 840 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 IFIT1BQ5T764 474 aaKnown RBP15.45■□□□□ 0.06
VPS52-212ENST00000445902 KLHDC7AQ5VTJ3 777 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 C6orf89Q6UWU4 347 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 CABLES1Q8TDN4 633 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 GDF3Q9NR23 364 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 LRRC53A6NM62 1247 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 PDE8BO95263 885 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 WLSQ5T9L3 541 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 LRRC15Q8TF66 581 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 PAGR1Q9BTK6 254 aa15.45■□□□□ 0.06
VPS52-212ENST00000445902 GCFC2P16383 781 aaKnown RBP15.44■□□□□ 0.06
VPS52-212ENST00000445902 PRLRP16471 622 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 ODF2Q5BJF6 829 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 CATIPQ7Z7H3 387 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 VGLL2Q8N8G2 317 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 RUBCNQ92622 972 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 FBXO3Q9UK99 471 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 ANKRD18BA2A2Z9 1011 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 GOLGA6L10A6NI86 522 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 CSF1RP07333 972 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 STK4Q13043 487 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 DDX42Q86XP3 938 aaKnown RBP eCLIP15.44■□□□□ 0.06
VPS52-212ENST00000445902 RETREG2Q8NC44 543 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 LPIN2Q92539 896 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 RTL9Q8NET4 1388 aa15.44■□□□□ 0.06
VPS52-212ENST00000445902 NMT2O60551 498 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 TNFRSF8P28908 595 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 PDE4DQ08499 809 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms