RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 SCN5AQ14524 2016 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 DCXO43602 365 aa16.61■□□□□ 0.25
SHANK2-209ENST00000445654 TTLL1O95922 423 aa16.61■□□□□ 0.25
SHANK2-209ENST00000445654 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
SHANK2-209ENST00000445654 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-209ENST00000445654 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
SHANK2-209ENST00000445654 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
SHANK2-209ENST00000445654 FBXO16Q8IX29 292 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-209ENST00000445654 ZNF444Q8N0Y2 327 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-209ENST00000445654 TRERF1Q96PN7 1200 aa16.61■□□□□ 0.25
SHANK2-209ENST00000445654 TGS1Q96RS0 853 aaKnown RBP16.61■□□□□ 0.25
SHANK2-209ENST00000445654 MPHOSPH6Q99547 160 aaKnown RBP16.61■□□□□ 0.25
SHANK2-209ENST00000445654 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.258e-7■■■□□ 18.4
SHANK2-209ENST00000445654 MYL3P08590 195 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 PTCRAQ6ISU1 281 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-209ENST00000445654 CEP85Q6P2H3 762 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 CAGE1Q8TC20 777 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 AFAP1L1Q8TED9 768 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 GDPD5Q8WTR4 605 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 RAD9AQ99638 391 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
SHANK2-209ENST00000445654 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
SHANK2-209ENST00000445654 ISY1Q9ULR0 285 aaKnown RBP16.6■□□□□ 0.25
SHANK2-209ENST00000445654 MYH7P12883 1935 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 IGKV6D-41A0A0C4DH26 115 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 PLA2G6O60733 806 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 ALAS1P13196 640 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 KCNA5P22460 613 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 ERVK-21P61565 698 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 EEPD1Q7L9B9 569 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 OR6J1Q8NGC5 347 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 STAG1Q8WVM7 1258 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 MFSD14AQ96MC6 490 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 FBXL18Q96ME1 805 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 WDR11Q9BZH6 1224 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 MTMR4Q9NYA4 1195 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 CYP39A1Q9NYL5 469 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 PRKAG3Q9UGI9 489 aa16.59■□□□□ 0.25
SHANK2-209ENST00000445654 ARHGEF15O94989 841 aa16.58■□□□□ 0.24
SHANK2-209ENST00000445654 WDR5P61964 334 aaKnown RBP16.58■□□□□ 0.24
SHANK2-209ENST00000445654 PTPROQ16827 1216 aa16.58■□□□□ 0.24
SHANK2-209ENST00000445654 NBPF20Q3BBV1 942 aa16.58■□□□□ 0.24
SHANK2-209ENST00000445654 CNKSR3Q6P9H4 555 aa16.58■□□□□ 0.24
SHANK2-209ENST00000445654 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-209ENST00000445654 GMCL1Q96IK5 515 aa16.58■□□□□ 0.24
SHANK2-209ENST00000445654 ABHD14A-ACY1A0A1B0GW23 586 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 GRXCR2A6NFK2 248 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 MINDY4BA8MYZ0 360 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 ATP5JP18859 108 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 HAUS7Q99871 368 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 SUGCTQ9HAC7 445 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 SCN10AQ9Y5Y9 1956 aa16.57■□□□□ 0.24
SHANK2-209ENST00000445654 RBM47A0AV96 593 aaKnown RBP16.56■□□□□ 0.24
SHANK2-209ENST00000445654 POTEB3A0JP26 581 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 B4DLN1 442 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 GJB5O95377 273 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 IL9P15248 144 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 SLC1A4P43007 532 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 MRPL12P52815 198 aaKnown RBP16.56■□□□□ 0.24
SHANK2-209ENST00000445654 TIGD5Q53EQ6 642 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 POTEBQ6S5H4 581 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 NSMFQ6X4W1 530 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 LRRC47Q8N1G4 583 aaKnown RBP16.56■□□□□ 0.24
SHANK2-209ENST00000445654 SAMD11Q96NU1 681 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 PRRX2Q99811 253 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 SIP14410 1827 aa16.56■□□□□ 0.24
SHANK2-209ENST00000445654 PLIN4Q96Q06 1357 aa16.55■□□□□ 0.24
SHANK2-209ENST00000445654 HMMRO75330 724 aa16.55■□□□□ 0.24
SHANK2-209ENST00000445654 TSPY3P0CV98 308 aa16.55■□□□□ 0.24
SHANK2-209ENST00000445654 TSPY8P0CW00 308 aa16.55■□□□□ 0.24
SHANK2-209ENST00000445654 GNAT2P19087 354 aa16.55■□□□□ 0.24
SHANK2-209ENST00000445654 PPP2R5BQ15173 497 aa16.55■□□□□ 0.24
SHANK2-209ENST00000445654 STRBPQ96SI9 672 aaKnown RBP16.55■□□□□ 0.24
SHANK2-209ENST00000445654 PUS7LQ9H0K6 701 aaKnown RBP16.55■□□□□ 0.24
SHANK2-209ENST00000445654 PNMA2Q9UL42 364 aa16.55■□□□□ 0.24
SHANK2-209ENST00000445654 LCHNA4D1U4 455 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 LINC01553A4QN01 128 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 A6NJR5 290 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 ST18O60284 1047 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
SHANK2-209ENST00000445654 SELPP16109 830 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 ALDH5A1P51649 535 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-209ENST00000445654 PDE4BQ07343 736 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 IKBKEQ14164 716 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 PKN1Q16512 942 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 PTGISQ16647 500 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 NEDD1Q8NHV4 660 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 SCFD2Q8WU76 684 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms