RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ERBB4Q15303 1308 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CDC42BPBQ9Y5S2 1711 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 FAM170AA1A519 330 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DNAJC8O75937 253 aaPredicted RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 POU3F2P20265 443 aaPredicted RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ABCD1P33897 745 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DGKGP49619 791 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NEK3P51956 506 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 LYSMD3Q7Z3D4 306 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 IFNL2Q8IZJ0 200 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 APPL2Q8NEU8 664 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PJA1Q8NG27 643 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SH3GLB2Q9NR46 395 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MKL2Q9ULH7 1088 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TNKSO95271 1327 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 KIF15Q9NS87 1388 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CCDC141Q6ZP82 1450 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CTAGE5O15320 804 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 FBXO21O94952 628 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 B3GALT4O96024 378 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 KIF5BP33176 963 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ADD2P35612 726 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SH3BGRP55822 239 aaPredicted RBP6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SUMO1P63165 101 aaKnown RBP6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SLMAPQ14BN4 828 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MMS22LQ6ZRQ5 1243 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PODNQ7Z5L7 613 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ARL10Q8N8L6 244 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TIFAQ96CG3 184 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 FAM163AQ96GL9 167 aaPredicted RBP6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SARGQ9BW04 601 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RUBCNLQ9H714 662 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 GPAMQ9HCL2 828 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 LUC7L2Q9Y383 392 aaKnown RBP6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CCDC7Q96M83 1385 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CNTLNQ9NXG0 1405 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MBD5Q9P267 1494 aa6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 POLR1AO95602 1720 aaPredicted RBP6.75□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 OPA1O60313 960 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 KPNA6O60684 536 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NCAM1P13591 858 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SARSP49591 514 aaKnown RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PPP2R2AP63151 447 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CCT2P78371 535 aaKnown RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PCDH1Q08174 1060 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MINDY4Q4G0A6 757 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MAP1SQ66K74 1059 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NFXL1Q6ZNB6 911 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MAATS1Q7Z4T9 603 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 COG1Q8WTW3 980 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 BSNDQ8WZ55 320 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SPAG5Q96R06 1193 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SLC9A7Q96T83 725 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PBX4Q9BYU1 374 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 IFT22Q9H7X7 185 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RMI1Q9H9A7 625 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DCAF16Q9NXF7 216 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 XPO7Q9UIA9 1087 aaKnown RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ABCC2Q92887 1545 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 KDM5DQ9BY66 1539 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SLC22A31A6NKX4 558 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 C19orf81C9J6K1 198 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 IPO7O95373 1038 aaKnown RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PYGMP11217 842 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 HOXD8P13378 290 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 IDEP14735 1019 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF252P-AS1Q0IIN9 211 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PTPN21Q16825 1174 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 C16orf54Q6UWD8 224 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TPH2Q8IWU9 490 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 OR8H2Q8N162 312 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ENAHQ8N8S7 591 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TAF4BQ92750 862 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 N4BP2L2Q92802 583 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SYAP1Q96A49 352 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CENPOQ9BU64 300 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RASSF4Q9H2L5 321 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 OSGEPQ9NPF4 335 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SUCOQ9UBS9 1254 aaKnown RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF214Q9UL59 606 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TNPO3Q9Y5L0 923 aaKnown RBP6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CORINQ9Y5Q5 1042 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SPATA31E1Q6ZUB1 1445 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ARHGAP5Q13017 1502 aa6.74□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 A6NCN8 305 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TNFRSF10CO14798 259 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SNX2O60749 519 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 UPP2O95045 317 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 HALP42357 657 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SEPT7Q16181 437 aaKnown RBP6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PARP10Q53GL7 1025 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF449Q6P9G9 518 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MPRIPQ6WCQ1 1025 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DHX32Q7L7V1 743 aaKnown RBP6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MORC1Q86VD1 984 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 USP33Q8TEY7 942 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms