RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 ELP3Q9H9T3 547 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 TRMT1Q9NXH9 659 aaKnown RBP17.74■□□□□ 0.43
TVP23C-203ENST00000428082 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 SLC1A4P43007 532 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 SPP2Q13103 211 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 NR5A1Q13285 461 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 DGKZQ13574 1117 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 MORC3Q14149 939 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 CCDC96Q2M329 555 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 SLC35G1Q2M3R5 365 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 E4F1Q66K89 784 aaPredicted RBP17.74■□□□□ 0.43
TVP23C-203ENST00000428082 ZNF280CQ8ND82 737 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 PPP1R13BQ96KQ4 1090 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 GPCPD1Q9NPB8 672 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 CNTNAP5Q8WYK1 1306 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 USP17L10C9JJH3 530 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 ATP1A3P13637 1013 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 MTMR2Q13614 643 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 ASPRV1Q53RT3 343 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 LDLRAD1Q5T700 205 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 CST9Q5W186 159 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 KIAA1683Q9H0B3 1180 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 GBA2Q9HCG7 927 aaPredicted RBP17.73■□□□□ 0.43
TVP23C-203ENST00000428082 FANCLQ9NW38 375 aa17.73■□□□□ 0.43
TVP23C-203ENST00000428082 ZSCAN12O43309 604 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 GNAQP50148 359 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 PKN1Q16512 942 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 TTBK2Q6IQ55 1244 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 UBA5Q9GZZ9 404 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 hCG_1642624A0A1W2PR95 340 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 GOLGA6L9A6NEM1 432 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 ACTN4O43707 911 aaKnown RBP17.72■□□□□ 0.43
TVP23C-203ENST00000428082 CYTH3O43739 400 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 SLU7O95391 586 aaKnown RBP17.72■□□□□ 0.43
TVP23C-203ENST00000428082 CDK11BP21127 795 aaKnown RBP17.72■□□□□ 0.43
TVP23C-203ENST00000428082 TRAPPC10P48553 1259 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 GPATCH4Q5T3I0 446 aaKnown RBP17.72■□□□□ 0.43
TVP23C-203ENST00000428082 SMAP1Q8IYB5 467 aaPredicted RBP17.72■□□□□ 0.43
TVP23C-203ENST00000428082 SPATA20Q8TB22 786 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 CSRNP2Q9H175 543 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 TMX1Q9H3N1 280 aa17.72■□□□□ 0.43
TVP23C-203ENST00000428082 PTPRFP10586 1907 aa17.71■□□□□ 0.43
TVP23C-203ENST00000428082 BMP3P12645 472 aa17.71■□□□□ 0.43
TVP23C-203ENST00000428082 YY1P25490 414 aa17.71■□□□□ 0.43
TVP23C-203ENST00000428082 BACE1P56817 501 aa17.71■□□□□ 0.43
TVP23C-203ENST00000428082 FKBP1BP68106 108 aa17.71■□□□□ 0.43
TVP23C-203ENST00000428082 OXER1Q8TDS5 423 aa17.71■□□□□ 0.43
TVP23C-203ENST00000428082 VPS54Q9P1Q0 977 aa17.71■□□□□ 0.43
TVP23C-203ENST00000428082 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
TVP23C-203ENST00000428082 SLFN14P0C7P3 912 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 SLC16A2P36021 539 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 SPECC1Q5M775 1068 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 C2orf69Q8N8R5 385 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 OTUD5Q96G74 571 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 EMILIN3Q9NT22 766 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 ARHGAP6O43182 974 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 ZNF18P17022 549 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 PPATQ06203 517 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 SPZ1Q9BXG8 430 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 NFE2L3Q9Y4A8 694 aa17.7■□□□□ 0.42
TVP23C-203ENST00000428082 PHLPP2Q6ZVD8 1323 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 TMEM232C9JQI7 657 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 PRKCSHP14314 528 aaPredicted RBP17.69■□□□□ 0.42
TVP23C-203ENST00000428082 ATP2B1P20020 1258 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 BMP6P22004 513 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 USP14P54578 494 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 HMGCS2P54868 508 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 GRIN1Q05586 938 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 GSDMAQ96QA5 445 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 L2HGDHQ9H9P8 463 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 VAT1LQ9HCJ6 419 aa17.69■□□□□ 0.42
TVP23C-203ENST00000428082 IRF6O14896 467 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 CALML3P27482 149 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 TTC38Q5R3I4 469 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 HOMER1Q86YM7 354 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
TVP23C-203ENST00000428082 LPAR1Q92633 364 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 OPTNQ96CV9 577 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 SLC10A4Q96EP9 437 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 RIOX1Q9H6W3 641 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 UNCXA6NJT0 531 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 C19orf81C9J6K1 198 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 FOXN1O15353 648 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 SMARCA1P28370 1054 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
TVP23C-203ENST00000428082 SRRTQ9BXP5 876 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms