RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 A0A1W2PQ45 241 aaPredicted RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 A0A1W2PQY0 241 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 RBM47A0AV96 593 aaKnown RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 KLRF2D3W0D1 207 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 SH2B2O14492 632 aaPredicted RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 ZBTB5O15062 677 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 CTAGE5O15320 804 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 DDAH1O94760 285 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 CALML3P27482 149 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 MCM5P33992 734 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 ATN1P54259 1190 aaPredicted RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 TNFAIP2Q03169 654 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 SLC35G1Q2M3R5 365 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 USH1GQ495M9 461 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 RNF20Q5VTR2 975 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 ERICH6BQ5W0A0 696 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 IQSEC1Q6DN90 963 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 TAPT1Q6NXT6 567 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 CHST3Q7LGC8 479 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 CATIPQ7Z7H3 387 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 MCF2L2Q86YR7 1114 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 FBXO16Q8IX29 292 aaPredicted RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 TMTC2Q8N394 836 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 PCSK9Q8NBP7 692 aaKnown RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 PURBQ96QR8 312 aaKnown RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 MPHOSPH6Q99547 160 aaKnown RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 AMNQ9BXJ7 453 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 RIOX1Q9H6W3 641 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 SPC25Q9HBM1 224 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 MRPL11Q9Y3B7 192 aaKnown RBP8.41□□□□□ -1.06
FARP1-204ENST00000427404 Q9Y3F1 56 aa8.41□□□□□ -1.06
FARP1-204ENST00000427404 LTBP2Q14767 1821 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 ELP1O95163 1332 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 MYADML2A6NDP7 307 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 B4DLN1 442 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 PRC1O43663 620 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 DHX16O60231 1041 aaKnown RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 PPP1R11O60927 126 aaPredicted RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 C6orf222P0C671 652 aaPredicted RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 SMARCA1P28370 1054 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 LIFRP42702 1097 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 MAGEA10P43363 369 aaPredicted RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 FXR1P51114 621 aaKnown RBP eCLIP8.4□□□□□ -1.06
FARP1-204ENST00000427404 HSD17B4P51659 736 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 MRPL12P52815 198 aaKnown RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 ACLYP53396 1101 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 TRAF1Q13077 416 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 KCNA10Q16322 511 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 TSGA10IPQ3SY00 556 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 TRIM60Q495X7 471 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 DUSP28Q4G0W2 176 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 TLK2Q86UE8 772 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 ZNF654Q8IZM8 581 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 SAMD3Q8N6K7 520 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 SYTL5Q8TDW5 730 aaPredicted RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 NUP133Q8WUM0 1156 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 FERMT2Q96AC1 680 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 SPZ1Q9BXG8 430 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 VAT1LQ9HCJ6 419 aa8.4□□□□□ -1.06
FARP1-204ENST00000427404 MAP3K20Q9NYL2 800 aaKnown RBP8.4□□□□□ -1.06
FARP1-204ENST00000427404 PNMA6FA0A0J9YX94 578 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 OPLAHO14841 1288 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 NKRFO15226 690 aaKnown RBP eCLIP8.39□□□□□ -1.07
FARP1-204ENST00000427404 CYTH3O43739 400 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 ASGR1P07306 291 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 CALM1P0DP23 149 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 CALM2P0DP24 149 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 CALM3P0DP25 149 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 SMPD1P17405 629 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 SYN1P17600 705 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 KIF5BP33176 963 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 PDE4DQ08499 809 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
FARP1-204ENST00000427404 KRT32Q14532 448 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 FSCN1Q16658 493 aaKnown RBP8.39□□□□□ -1.07
FARP1-204ENST00000427404 GNASQ5JWF2 1037 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 ANKRD33Q7Z3H0 272 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 SGMS1Q86VZ5 419 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 CTCFLQ8NI51 663 aaPredicted RBP8.39□□□□□ -1.07
FARP1-204ENST00000427404 NSUN6Q8TEA1 469 aaKnown RBP8.39□□□□□ -1.07
FARP1-204ENST00000427404 TBC1D5Q92609 795 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 KCNB2Q92953 911 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 GLT1D1Q96MS3 346 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 TOX2Q96NM4 488 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 IWS1Q96ST2 819 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 LZTS2Q9BRK4 669 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 GPHNQ9NQX3 736 aaPredicted RBP8.39□□□□□ -1.07
FARP1-204ENST00000427404 STARD7Q9NQZ5 370 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 PDLIM7Q9NR12 457 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 PDGFCQ9NRA1 345 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 COL20A1Q9P218 1284 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 ATP11BQ9Y2G3 1177 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 DDX49Q9Y6V7 483 aaKnown RBP8.39□□□□□ -1.07
FARP1-204ENST00000427404 TRIOBPQ9H2D6 2365 aa8.39□□□□□ -1.07
FARP1-204ENST00000427404 MROH7Q68CQ1 1323 aa8.38□□□□□ -1.07
FARP1-204ENST00000427404 A0A0U1RQG5 324 aaPredicted RBP8.38□□□□□ -1.07
FARP1-204ENST00000427404 CCDC69A6NI79 296 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms