RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ANP32AP39687 249 aaKnown RBP27.7■■■□□ 2.02
APOE-202ENST00000425718 MAP2K5Q13163 448 aa27.7■■■□□ 2.02
APOE-202ENST00000425718 PWP2Q15269 919 aaKnown RBP27.7■■■□□ 2.02
APOE-202ENST00000425718 MORN1Q5T089 497 aa27.7■■■□□ 2.02
APOE-202ENST00000425718 DPP9Q86TI2 863 aa27.7■■■□□ 2.02
APOE-202ENST00000425718 TRMT44Q8IYL2 757 aaKnown RBP27.7■■■□□ 2.02
APOE-202ENST00000425718 ALG1Q9BT22 464 aa27.7■■■□□ 2.02
APOE-202ENST00000425718 A1CFQ9NQ94 594 aaKnown RBP27.7■■■□□ 2.02
APOE-202ENST00000425718 ZSWIM8A7E2V4 1837 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 NFIBO00712 420 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 ADORA2AP29274 412 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 ADCY7P51828 1080 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 ZMYND12Q9H0C1 365 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 RIC8AQ9NPQ8 531 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 CYP39A1Q9NYL5 469 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 ADD3Q9UEY8 706 aaKnown RBP27.69■■■□□ 2.02
APOE-202ENST00000425718 SRRDQ9UH36 339 aa27.69■■■□□ 2.02
APOE-202ENST00000425718 POTEB2H3BUK9 544 aa27.68■■■□□ 2.02
APOE-202ENST00000425718 PIK3CDO00329 1044 aa27.68■■■□□ 2.02
APOE-202ENST00000425718 JAK2O60674 1132 aa27.68■■■□□ 2.02
APOE-202ENST00000425718 CFBP00751 764 aa27.68■■■□□ 2.02
APOE-202ENST00000425718 XRCC5P13010 732 aaKnown RBP27.68■■■□□ 2.02
APOE-202ENST00000425718 EHMT1Q9H9B1 1298 aa27.68■■■□□ 2.02
APOE-202ENST00000425718 BRMS1Q9HCU9 246 aa27.68■■■□□ 2.02
APOE-202ENST00000425718 SMCO2A6NFE2 343 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 HOXC6P09630 235 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 FDPSP14324 419 aaKnown RBP27.67■■■□□ 2.02
APOE-202ENST00000425718 HSD17B4P51659 736 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 NLRP5P59047 1200 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 RPS6P62753 249 aaKnown RBP27.67■■■□□ 2.02
APOE-202ENST00000425718 IRF5Q13568 498 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 PKN2Q16513 984 aaKnown RBP27.67■■■□□ 2.02
APOE-202ENST00000425718 DNERQ8NFT8 737 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 APBA2Q99767 749 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 ARHGAP39Q9C0H5 1083 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 TRIM17Q9Y577 477 aa27.67■■■□□ 2.02
APOE-202ENST00000425718 FOSP01100 380 aaPredicted RBP27.66■■■□□ 2.02
APOE-202ENST00000425718 PDIA4P13667 645 aaKnown RBP27.66■■■□□ 2.02
APOE-202ENST00000425718 PDCP20941 246 aa27.66■■■□□ 2.02
APOE-202ENST00000425718 BAATQ14032 418 aaPredicted RBP27.66■■■□□ 2.02
APOE-202ENST00000425718 CTU1Q7Z7A3 348 aaKnown RBP27.66■■■□□ 2.02
APOE-202ENST00000425718 MSL3Q8N5Y2 521 aaKnown RBP27.66■■■□□ 2.02
APOE-202ENST00000425718 VPS54Q9P1Q0 977 aa27.66■■■□□ 2.02
APOE-202ENST00000425718 GJD2Q9UKL4 321 aa27.66■■■□□ 2.02
APOE-202ENST00000425718 DNAJC25-GNG10A0A024R161 153 aa27.65■■■□□ 2.02
APOE-202ENST00000425718 PPFIA3O75145 1194 aa27.65■■■□□ 2.02
APOE-202ENST00000425718 CTGFP29279 349 aa27.65■■■□□ 2.02
APOE-202ENST00000425718 OTOP1Q7RTM1 612 aa27.65■■■□□ 2.02
APOE-202ENST00000425718 ZNF467Q7Z7K2 595 aaPredicted RBP27.65■■■□□ 2.02
APOE-202ENST00000425718 USP6NLQ92738 828 aa27.65■■■□□ 2.02
APOE-202ENST00000425718 C8orf76Q96K31 380 aa27.65■■■□□ 2.02
APOE-202ENST00000425718 GJB2P29033 226 aa27.64■■■□□ 2.02
APOE-202ENST00000425718 AP3B2Q13367 1082 aa27.64■■■□□ 2.02
APOE-202ENST00000425718 SAFBQ15424 915 aaKnown RBP eCLIP27.64■■■□□ 2.02
APOE-202ENST00000425718 DAGLBQ8NCG7 672 aa27.64■■■□□ 2.02
APOE-202ENST00000425718 RAET1EQ8TD07 263 aa27.64■■■□□ 2.02
APOE-202ENST00000425718 LCTP09848 1927 aa27.64■■■□□ 2.02
APOE-202ENST00000425718 OPLAHO14841 1288 aa27.63■■■□□ 2.01
APOE-202ENST00000425718 TAL1P17542 331 aaPredicted RBP27.63■■■□□ 2.01
APOE-202ENST00000425718 FLT3LGP49771 235 aa27.63■■■□□ 2.01
APOE-202ENST00000425718 FAM133AQ8N9E0 248 aa27.63■■■□□ 2.01
APOE-202ENST00000425718 PCDHA4Q9UN74 947 aa27.63■■■□□ 2.01
APOE-202ENST00000425718 ASB14A6NK59 587 aa27.62■■■□□ 2.01
APOE-202ENST00000425718 SPDYE3A6NKU9 549 aa27.62■■■□□ 2.01
APOE-202ENST00000425718 PRKCZQ05513 592 aa27.62■■■□□ 2.01
APOE-202ENST00000425718 ZNF792Q3KQV3 632 aa27.62■■■□□ 2.01
APOE-202ENST00000425718 TYW1BQ6NUM6 668 aa27.62■■■□□ 2.01
APOE-202ENST00000425718 REXO1Q8N1G1 1221 aaKnown RBP27.62■■■□□ 2.01
APOE-202ENST00000425718 SYTL5Q8TDW5 730 aaPredicted RBP27.62■■■□□ 2.01
APOE-202ENST00000425718 PHF20Q9BVI0 1012 aa27.62■■■□□ 2.01
APOE-202ENST00000425718 ECM2O94769 699 aaPredicted RBP27.61■■■□□ 2.01
APOE-202ENST00000425718 OLFML2BQ68BL8 750 aa27.61■■■□□ 2.01
APOE-202ENST00000425718 SLC30A10Q6XR72 485 aa27.61■■■□□ 2.01
APOE-202ENST00000425718 PXYLP1Q8TE99 480 aa27.61■■■□□ 2.01
APOE-202ENST00000425718 NSUN6Q8TEA1 469 aaKnown RBP27.61■■■□□ 2.01
APOE-202ENST00000425718 IWS1Q96ST2 819 aa27.61■■■□□ 2.01
APOE-202ENST00000425718 DAXXQ9UER7 740 aaPredicted RBP27.61■■■□□ 2.01
APOE-202ENST00000425718 MCM3APO60318 1980 aa27.6■■■□□ 2.01
APOE-202ENST00000425718 MEIS2O14770 477 aa27.6■■■□□ 2.01
APOE-202ENST00000425718 CYP2B6P20813 491 aa27.6■■■□□ 2.01
APOE-202ENST00000425718 BLIDQ8IZY5 108 aa27.6■■■□□ 2.01
APOE-202ENST00000425718 SLAIN1Q8ND83 568 aa27.6■■■□□ 2.01
APOE-202ENST00000425718 AIFM3Q96NN9 605 aa27.6■■■□□ 2.01
APOE-202ENST00000425718 COBLO75128 1261 aa27.59■■■□□ 2.01
APOE-202ENST00000425718 PGK2P07205 417 aa27.59■■■□□ 2.01
APOE-202ENST00000425718 FBXO18Q8NFZ0 1043 aa27.59■■■□□ 2.01
APOE-202ENST00000425718 RMDN3Q96TC7 470 aa27.59■■■□□ 2.01
APOE-202ENST00000425718 GABRQQ9UN88 632 aa27.59■■■□□ 2.01
APOE-202ENST00000425718 PTPN22Q9Y2R2 807 aa27.59■■■□□ 2.01
APOE-202ENST00000425718 H3BQV1 296 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 MMP1P03956 469 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 KRT2P35908 639 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 IFFO2Q5TF58 517 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 ARHGEF16Q5VV41 709 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 LARP1BQ659C4 914 aaKnown RBP27.58■■■□□ 2.01
APOE-202ENST00000425718 KRT40Q6A162 431 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 USP17L6PQ6QN14 398 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 TBC1D5Q92609 795 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 MAML3Q96JK9 1138 aa27.58■■■□□ 2.01
APOE-202ENST00000425718 SYNGAP1Q96PV0 1343 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms