RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ALS2CLQ60I27 953 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 RPGRIP1Q96KN7 1286 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 GSDMAQ96QA5 445 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 TRIM75PA6NK02 468 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 SMIM23A6NLE4 172 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 CYLC1P35663 651 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 FOXO4P98177 505 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 SPA17Q15506 151 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 EMBQ6PCB8 327 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 CASKIN2Q8WXE0 1202 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 HVCN1Q96D96 273 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 NUP58Q9BVL2 599 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 GGA2Q9UJY4 613 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 SNAP23O00161 211 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 ANP32DO95626 131 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 HSPA1LP34931 641 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 GFPT1Q06210 699 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 IQCEQ6IPM2 695 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 MMGT1Q8N4V1 131 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 DNAJC7Q99615 494 aa12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 NOVA2Q9UNW9 492 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 LRRC10BA6NIK2 292 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 A8MUI8 341 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 PRKAB2O43741 272 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 EPB41P11171 864 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 FLT3P36888 993 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 PAFAH1B1P43034 410 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 ARID5AQ03989 594 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 ELOA2Q8IYF1 753 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 FBXL16Q8N461 479 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 APPBP2Q92624 585 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 SLC52A2Q9HAB3 445 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 CEP126Q9P2H0 1117 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 OVOS2A0A0G2JMS6 1433 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 SIPA1L3O60292 1781 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 NUTM2BA6NNL0 878 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 NUTM2EB1AL46 878 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 AKR1B10O60218 316 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 DIAPH2O60879 1101 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 FMNL1O95466 1100 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 SLC8A3P57103 927 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 ELF3P78545 371 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 RTN1Q16799 776 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 CCDC155Q8N6L0 562 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 MAB21L3Q8N8X9 362 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 ARMC2Q8NEN0 867 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 SH3GL3Q99963 347 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 ATP6V0A4Q9HBG4 840 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 ETAA1Q9NY74 926 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 CAPN11Q9UMQ6 739 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 MRC1P22897 1456 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 TACC1O75410 805 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 VEGFAP15692 232 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 DRP2Q13474 957 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 BYSLQ13895 437 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 SPICE1Q8N0Z3 855 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 UBLCP1Q8WVY7 318 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 SLC39A2Q9NP94 309 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 PANK4Q9NVE7 773 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 PCDHA13Q9Y5I0 950 aa12.49□□□□□ -0.41
SEC61A1-202ENST00000424880 RCSD1Q6JBY9 416 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 CCDC50Q8IVM0 306 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 RAPGEF5Q92565 580 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 TUBGCP2Q9BSJ2 902 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 IRAK4Q9NWZ3 460 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 NWD2Q9ULI1 1742 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 GOLGA6L10A6NI86 522 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 EYA2O00167 538 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 CAND2O75155 1236 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 RPN1P04843 607 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 EIF4A3P38919 411 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 BZW1Q7L1Q6 419 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 KIF2BQ8N4N8 673 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 FAM210AQ96ND0 272 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 TLR10Q9BXR5 811 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 TRIM31Q9BZY9 425 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
SEC61A1-202ENST00000424880 V9GY48 417 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 383.5 ms