RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PDHBP11177 359 aa18.46■□□□□ 0.54
PKP4-204ENST00000421462 STK4Q13043 487 aa18.46■□□□□ 0.54
PKP4-204ENST00000421462 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.54
PKP4-204ENST00000421462 MICALCLQ6ZW33 695 aa18.46■□□□□ 0.54
PKP4-204ENST00000421462 IQCA1Q86XH1 822 aa18.46■□□□□ 0.54
PKP4-204ENST00000421462 CCDC13Q8IYE1 715 aa18.46■□□□□ 0.54
PKP4-204ENST00000421462 DUSP9Q99956 384 aaKnown RBP18.46■□□□□ 0.54
PKP4-204ENST00000421462 PPP1R37O75864 691 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 DYNLL1P63167 89 aaKnown RBP18.45■□□□□ 0.54
PKP4-204ENST00000421462 SEC23AQ15436 765 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 TTI2Q6NXR4 508 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 DTHD1Q6ZMT9 781 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 VGLL2Q8N8G2 317 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 LPIN2Q92539 896 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 TMEM60Q9H2L4 133 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 SLC39A2Q9NP94 309 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 FBXO3Q9UK99 471 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 TMOD1P28289 359 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 NAALADL2Q58DX5 795 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 MTMR8Q96EF0 704 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 THAP9Q9H5L6 903 aa18.45■□□□□ 0.54
PKP4-204ENST00000421462 RTL9Q8NET4 1388 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 SLC5A1P13866 664 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 NF2P35240 595 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 SKOR1P84550 965 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 PTGISQ16647 500 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 IFT20Q8IY31 132 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 MYCBPAPQ8TBZ2 947 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 TSGA10Q9BZW7 698 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.544e-8■■■□□ 17.8
PKP4-204ENST00000421462 TCP1P17987 556 aaKnown RBP18.44■□□□□ 0.54
PKP4-204ENST00000421462 ARID4AP29374 1257 aaPredicted RBP18.44■□□□□ 0.54
PKP4-204ENST00000421462 FUT2Q10981 343 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 CCDC121Q6ZUS5 278 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 CACNA2D4Q7Z3S7 1137 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 TTYH3Q9C0H2 523 aa18.44■□□□□ 0.54
PKP4-204ENST00000421462 LRRC53A6NM62 1247 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 RPSAP08865 295 aaKnown RBP18.43■□□□□ 0.54
PKP4-204ENST00000421462 SLC1A4P43007 532 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 INF2Q27J81 1249 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
PKP4-204ENST00000421462 NUP58Q9BVL2 599 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 PLAAQ9Y263 795 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
PKP4-204ENST00000421462 MYH2Q9UKX2 1941 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 SLIT3O75094 1523 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 TNFRSF25Q93038 417 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 P2RX5Q93086 422 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 ODF2LQ9ULJ1 636 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 FAM205AQ6ZU69 1335 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 EHHADHQ08426 723 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 NLRP10Q86W26 655 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 DDX42Q86XP3 938 aaKnown RBP eCLIP18.43■□□□□ 0.54
PKP4-204ENST00000421462 TLR10Q9BXR5 811 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 SLC40A1Q9NP59 571 aa18.43■□□□□ 0.54
PKP4-204ENST00000421462 CCDC194A0A1B0GVG4 234 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 GOLGA6L10A6NI86 522 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 CHUKO15111 745 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 SCG2P13521 617 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 TROAPQ12815 778 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 SPRED3Q2MJR0 410 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 CFAP221Q4G0U5 840 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 LRRC15Q8TF66 581 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.42■□□□□ 0.54
PKP4-204ENST00000421462 GOLPH3Q9H4A6 298 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 KANSL2Q9H9L4 492 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 HAUS2Q9NVX0 235 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 WTIPA6NIX2 430 aaPredicted RBP18.42■□□□□ 0.54
PKP4-204ENST00000421462 FSBPO95073 299 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 MDH1P40925 334 aaKnown RBP18.42■□□□□ 0.54
PKP4-204ENST00000421462 DNAAF5Q86Y56 855 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 PURBQ96QR8 312 aaKnown RBP18.42■□□□□ 0.54
PKP4-204ENST00000421462 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
PKP4-204ENST00000421462 KLRC4O43908 158 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 TMTC3Q6ZXV5 915 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 CASKIN2Q8WXE0 1202 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 MAGEB6P1A0A0J9YX57 407 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 PAK2Q13177 524 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 MIIPQ5JXC2 388 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 DYMQ7RTS9 669 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 DONSONQ9NYP3 566 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 ATRNO75882 1429 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 TJP1Q07157 1748 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 NEDD9Q14511 834 aa18.41■□□□□ 0.54
PKP4-204ENST00000421462 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
PKP4-204ENST00000421462 EPB41P11171 864 aaKnown RBP18.4■□□□□ 0.54
PKP4-204ENST00000421462 GNAT2P19087 354 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 PLCG1P19174 1290 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 KDM7AQ6ZMT4 941 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 IQCKQ8N0W5 287 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 GIMAP8Q8ND71 665 aaPredicted RBP18.4■□□□□ 0.54
PKP4-204ENST00000421462 TBC1D31Q96DN5 1066 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 ATP6V1G3Q96LB4 118 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 NOX5Q96PH1 765 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 USP17L12C9JPN9 530 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 USP17L21D6R901 530 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 OPLAHO14841 1288 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 PALMO75781 387 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 LONP1P36776 959 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 633.7 ms