RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ASPRV1Q53RT3 343 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 GNASQ5JWF2 1037 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 C9orf50Q5SZB4 431 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 STOX1Q6ZVD7 989 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 STAG2Q8N3U4 1231 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 PCSK9Q8NBP7 692 aaKnown RBP12.93□□□□□ -0.34
SSBP3-206ENST00000420121 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 VTA1Q9NP79 307 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 PRKAG2Q9UGJ0 569 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 SCN10AQ9Y5Y9 1956 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 GRIN2DO15399 1336 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 LOC102724159A0A0B4J2E5 919 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 RBM47A0AV96 593 aaKnown RBP12.92□□□□□ -0.34
SSBP3-206ENST00000420121 PTPDC1A2A3K4 754 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 CALML3P27482 149 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 PWP2Q15269 919 aaKnown RBP12.92□□□□□ -0.34
SSBP3-206ENST00000420121 SHHQ15465 462 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 CDC37Q16543 378 aaPredicted RBP12.92□□□□□ -0.34
SSBP3-206ENST00000420121 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 RNF207Q6ZRF8 634 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 Q7L0L9 218 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 TLK2Q86UE8 772 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 GLT1D1Q96MS3 346 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 JMJD4Q9H9V9 463 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
SSBP3-206ENST00000420121 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
SSBP3-206ENST00000420121 ARVCFO00192 962 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 OPLAHO14841 1288 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 FSCN1Q16658 493 aaKnown RBP12.91□□□□□ -0.34
SSBP3-206ENST00000420121 QRICH1Q2TAL8 776 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 USH1GQ495M9 461 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 RGS22Q8NE09 1264 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 MAP4K1Q92918 833 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 MTMR8Q96EF0 704 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 MAD2L2Q9UI95 211 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 Q9Y3F1 56 aa12.91□□□□□ -0.34
SSBP3-206ENST00000420121 MYH7BA7E2Y1 1941 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-206ENST00000420121 E7EWF7 191 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 DYNC1LI2O43237 492 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-206ENST00000420121 PPP1R11O60927 126 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-206ENST00000420121 CD4P01730 458 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 PARP1P09874 1014 aaKnown RBP12.9□□□□□ -0.34
SSBP3-206ENST00000420121 ANTXR2P58335 489 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 COL9A3Q14050 684 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-206ENST00000420121 DUSP28Q4G0W2 176 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
SSBP3-206ENST00000420121 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 SKAP1Q86WV1 359 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 DNERQ8NFT8 737 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 UBAC1Q9BSL1 405 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 TMEM39AQ9NV64 488 aa12.9□□□□□ -0.34
SSBP3-206ENST00000420121 ABCB11O95342 1321 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 PALM3A6NDB9 673 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-206ENST00000420121 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 DCDC2CA8MYV0 355 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
SSBP3-206ENST00000420121 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-206ENST00000420121 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 SYTL5Q8TDW5 730 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-206ENST00000420121 TAAR1Q96RJ0 339 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 MAF1Q9H063 256 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 MTMR10Q9NXD2 777 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 GBF1Q92538 1859 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 CDH23Q9H251 3354 aa12.89□□□□□ -0.35
SSBP3-206ENST00000420121 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 ARIH2O95376 493 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 TIMP1P01033 207 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 RAG1P15918 1043 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 GHRHRQ02643 423 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 TROAPQ12815 778 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 GRM4Q14833 912 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 CHST3Q7LGC8 479 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 LSG1Q9H089 658 aaKnown RBP12.88□□□□□ -0.35
SSBP3-206ENST00000420121 AP5M1Q9H0R1 490 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 RBM8AQ9Y5S9 174 aaKnown RBP12.88□□□□□ -0.35
SSBP3-206ENST00000420121 SCN5AQ14524 2016 aa12.88□□□□□ -0.35
SSBP3-206ENST00000420121 CYTH3O43739 400 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 CABYRO75952 493 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 PSMC6P62333 389 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 FPGSQ05932 587 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 PDE4DQ08499 809 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 TRDNQ13061 729 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 ITGA7Q13683 1181 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms