RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 BTBD11A6QL63 1104 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 NPIPB6E9PJ23 425 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 N4BP3O15049 544 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 PPP1R11O60927 126 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 CAPNS1P04632 268 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 SCG5P05408 212 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 ITGAVP06756 1048 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 SCRN1Q12765 414 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 BICRALQ6AI39 1079 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 RPTNQ6XPR3 784 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 NPM2Q86SE8 214 aaKnown RBP5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 CPNE8Q86YQ8 564 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 C8orf37Q96NL8 207 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 SGPP1Q9BX95 441 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 GPRC5CQ9NQ84 441 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 LRP2BPQ9P2M1 347 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 IRS2Q9Y4H2 1338 aa5.74□□□□□ -1.49
HMGB3P23-201ENST00000414981 C7orf72A4D263 438 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 NUDT19A8MXV4 375 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 B2RBV5 119 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 NPHS1O60500 1241 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 CPP00450 1065 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 DBHP09172 617 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 PLS3P13797 630 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 RAB33AQ14088 237 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 DDR2Q16832 855 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 MRM1Q6IN84 353 aaKnown RBP5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 ZC3H14Q6PJT7 736 aaKnown RBP5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 LDHDQ86WU2 507 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 C1QL4Q86Z23 238 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 LRRC56Q8IYG6 542 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 LZTR1Q8N653 840 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 HNRNPLLQ8WVV9 542 aaKnown RBP5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 MTA3Q9BTC8 594 aa5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB3P23-201ENST00000414981 AGRPO00253 132 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 THBDP07204 575 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 GLI4P10075 376 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 LINC00310P59036 64 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 CYP4F3Q08477 520 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 TESK1Q15569 626 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 ZNF385BQ569K4 471 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 CIAPIN1Q6FI81 312 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 ZNF227Q86WZ6 799 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 CELF2-AS1Q8N7Q2 184 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 NPLOC4Q8TAT6 608 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 FRS2Q8WU20 508 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 MZB1Q8WU39 189 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 SIGLEC10Q96LC7 697 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 ST7Q9NRC1 585 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 CLEC1BQ9P126 229 aa5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 CNOT6Q9ULM6 557 aaKnown RBP5.72□□□□□ -1.49
HMGB3P23-201ENST00000414981 F8W031 263 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 STK10O94804 968 aaKnown RBP5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 ATP2B1P20020 1258 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 CDR1P51861 262 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 TMC6Q7Z403 805 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 CABP7Q86V35 215 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 NETO2Q8NC67 525 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 BTN2A2Q8WVV5 523 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 SGSM3Q96HU1 749 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 LGR4Q9BXB1 951 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 KCTD3Q9Y597 815 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 IRAK3Q9Y616 596 aa5.71□□□□□ -1.5
HMGB3P23-201ENST00000414981 IRS4O14654 1257 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 TBX1O43435 398 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 TACR1P25103 407 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 SLC9A5Q14940 896 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 TARBP2Q15633 366 aaKnown RBP5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 SLC10A6Q3KNW5 377 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 PLEKHN1Q494U1 663 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 ACBD5Q5T8D3 534 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 CKAP2LQ8IYA6 745 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 KREMEN2Q8NCW0 462 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 ST13P5Q8NFI4 369 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 DPF3Q92784 378 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 ZNF669Q96BR6 464 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 ARMC5Q96C12 935 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 GULP1Q9UBP9 304 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 RWDD3Q9Y3V2 267 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 PCDHA5Q9Y5H7 936 aa5.7□□□□□ -1.5
HMGB3P23-201ENST00000414981 A0A1W2PQU0 124 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 ZC3H12DA2A288 527 aaKnown RBP5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 IQCA1LA6NCM1 817 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 RFXAPO00287 272 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 ARNTLO00327 626 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 NUAK1O60285 661 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 ZBTB7AO95365 584 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 SNRPB2P08579 225 aaKnown RBP5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 GTF2A2P52657 109 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 EPHB3P54753 998 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 GFRA1P56159 465 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 PRR5P85299 388 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 RBL2Q08999 1139 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 NBPF6Q5VWK0 638 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 IGDCC3Q8IVU1 814 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms