RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 KCNJ2P63252 427 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 SAFBQ15424 915 aaKnown RBP eCLIP14.13□□□□□ -0.15
HERC3-203ENST00000407637 WASHC4Q2M389 1173 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 CYB5R4Q7L1T6 521 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 IRF2BP1Q8IU81 584 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 CCDC170Q8IYT3 715 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 ALS2CR12Q96Q35 445 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 PAIP2Q9BPZ3 127 aaKnown RBP14.13□□□□□ -0.15
HERC3-203ENST00000407637 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.13□□□□□ -0.15
HERC3-203ENST00000407637 A0A1W2PQC6 194 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 NUTM2BA6NNL0 878 aaPredicted RBP14.13□□□□□ -0.15
HERC3-203ENST00000407637 GOLGA8AA7E2F4 631 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 A8MUI8 341 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 NUTM2EB1AL46 878 aaPredicted RBP14.13□□□□□ -0.15
HERC3-203ENST00000407637 ORC4O43929 436 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 EVI5O60447 810 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 GSTA1P08263 222 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 ALADP13716 330 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 SPA17Q15506 151 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 KRT12Q99456 494 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 EPAS1Q99814 870 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 IFIH1Q9BYX4 1025 aaKnown RBP14.13□□□□□ -0.15
HERC3-203ENST00000407637 ARHGEF10LQ9HCE6 1279 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 NOVA2Q9UNW9 492 aaKnown RBP14.13□□□□□ -0.15
HERC3-203ENST00000407637 AGAP1Q9UPQ3 857 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 EID1Q9Y6B2 187 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 XDHP47989 1333 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 MYH2Q9UKX2 1941 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 A0A1B0GVG6 124 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 DPPA5A6NC42 116 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 NEURL1BA8MQ27 555 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 LUC7L3O95232 432 aaKnown RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 PYGBP11216 843 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 ALDH5A1P51649 535 aaPredicted RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 ZNF268Q14587 947 aaPredicted RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 UAP1Q16222 522 aaPredicted RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 ANKRD20A2Q5SQ80 823 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 ANKRD20A1Q5TYW2 823 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 ANKRD20A3Q5VUR7 823 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 RIC3Q7Z5B4 369 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 GPIHBP1Q8IV16 184 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 ZNF507Q8TCN5 953 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 TTYH3Q9C0H2 523 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 ESF1Q9H501 851 aaKnown RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 PIDD1Q9HB75 910 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 KCNMB3Q9NPA1 279 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 B4DLN1 442 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 H0YGN5 161 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 ZBTB43O43298 467 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 USO1O60763 962 aaKnown RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 DDX58O95786 925 aaKnown RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 CTNNA1P35221 906 aaKnown RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 GCLCP48506 637 aaPredicted RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 TIMM10P62072 90 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 GCKRQ14397 625 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
HERC3-203ENST00000407637 LRIG3Q6UXM1 1119 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 TLR10Q9BXR5 811 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 FAM217BQ9NTX9 383 aaPredicted RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.15
HERC3-203ENST00000407637 CEP131Q9UPN4 1083 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 GDAQ9Y2T3 454 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 NFS1Q9Y697 457 aa14.12□□□□□ -0.15
HERC3-203ENST00000407637 PDS5AQ29RF7 1337 aaKnown RBP14.12□□□□□ -0.15
HERC3-203ENST00000407637 CFAP73A6NFT4 308 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 ZNF213O14771 459 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 SSRP1Q08945 709 aaKnown RBP14.11□□□□□ -0.15
HERC3-203ENST00000407637 MKRN4PQ13434 485 aaPredicted RBP14.11□□□□□ -0.15
HERC3-203ENST00000407637 CFAP221Q4G0U5 840 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 TRIM68Q6AZZ1 485 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 SPATA21Q7Z572 469 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 ANKRD13CQ8N6S4 541 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 MDM1Q8TC05 714 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 KCNV2Q8TDN2 545 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 OXER1Q8TDS5 423 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 CHMP6Q96FZ7 201 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 RGL1Q9NZL6 768 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 SPDYE5A6NIY4 337 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 RASSF10A6NK89 507 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 IFIT1P09914 478 aaKnown RBP14.11□□□□□ -0.15
HERC3-203ENST00000407637 MAGOHP61326 146 aaKnown RBP14.11□□□□□ -0.15
HERC3-203ENST00000407637 BIRC3Q13489 604 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 TAF11Q15544 211 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 MAGOHBQ96A72 148 aaKnown RBP14.11□□□□□ -0.15
HERC3-203ENST00000407637 CCDC42Q96M95 316 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
HERC3-203ENST00000407637 PCDHA13Q9Y5I0 950 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 WDR19Q8NEZ3 1342 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 COQ9O75208 318 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 NQO1P15559 274 aaKnown RBP14.11□□□□□ -0.15
HERC3-203ENST00000407637 CCND1P24385 295 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 TUBP50607 506 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 ANKS4BQ8N8V4 417 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 MYD88Q99836 296 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 CABP5Q9NP86 173 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms