RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 FAM20AQ96MK3 541 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 JAKMIP1Q96N16 626 aaKnown RBP4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 TMEM39BQ9GZU3 492 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 PCDHA6Q9UN73 950 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 PCDHA8Q9Y5H6 950 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 KDM3AQ9Y4C1 1321 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 TMEM88BA6NKF7 163 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 TRIM6-TRIM34B2RNG4 842 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 F5H6K3 240 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 TOB1P50616 345 aaPredicted RBP4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 KLRC3Q07444 240 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 BECN1Q14457 450 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 RILPL1Q5EBL4 403 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 GBA2Q9HCG7 927 aaPredicted RBP4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 DENND4CQ5VZ89 1909 aa4.22□□□□□ -1.73
FNDC3A-202ENST00000398316 SPATA31C2B4DYI2 1134 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 HTRA3P83110 453 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 EVX2Q03828 476 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 SLC39A14Q15043 492 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 RGMBQ6NW40 437 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 IFNL1Q8IU54 200 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 C12orf56Q8IXR9 622 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 RILPL2Q969X0 211 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 ARMC5Q96C12 935 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 TSEN34Q9BSV6 310 aaKnown RBP4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 ANO2Q9NQ90 1003 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 CHMP5Q9NZZ3 219 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 PRR12Q9ULL5 1215 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 GJA3Q9Y6H8 435 aa4.21□□□□□ -1.73
FNDC3A-202ENST00000398316 PLXNA4Q9HCM2 1894 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 KDM4AO75164 1064 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 RAD17O75943 681 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 PIGRP01833 764 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 MAPK4P31152 587 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 TDO2P48775 406 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 ICA1Q05084 483 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 CTDSPL2Q05D32 466 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 COG2Q14746 738 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 RTN1Q16799 776 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 IFIT1BQ5T764 474 aaKnown RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 ADGRF4Q8IZF3 695 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 ANKLE1Q8NAG6 615 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 SOCS4Q8WXH5 440 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 NIFKQ9BYG3 293 aaKnown RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 SENP2Q9HC62 589 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 VTA1Q9NP79 307 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 RBPJLQ9UBG7 517 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 SRPRBQ9Y5M8 271 aaKnown RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 ASTN2O75129 1339 aaPredicted RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 MCM3APO60318 1980 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 CTAGE5O15320 804 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 F13A1P00488 732 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 PTPREP23469 700 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 USP5P45974 858 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 SLFNL1Q499Z3 407 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 RESP18Q5W5W9 173 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 WWC2Q6AWC2 1192 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 MAPKAPK5Q8IW41 473 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 GIMAP8Q8ND71 665 aaPredicted RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 TUBE1Q9UJT0 475 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 B4E1Z4 1266 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 CAVIN2O95810 425 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 EFEMP2O95967 443 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 PARP1P09874 1014 aaKnown RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 SLC26A2P50443 739 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 MARSP56192 900 aaKnown RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 PLCB2Q00722 1185 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 TRDNQ13061 729 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 KIAA0825Q8IV33 1275 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 BRI3BPQ8WY22 251 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 HVCN1Q96D96 273 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 P2RX7Q99572 595 aaKnown RBP4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 PTPN18Q99952 460 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 GREB1Q4ZG55 1949 aa4.21□□□□□ -1.74
FNDC3A-202ENST00000398316 PSMD10O75832 226 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 LONP1P36776 959 aaKnown RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 STAT2P52630 851 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 IRX3P78415 501 aaPredicted RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 TMEM67Q5HYA8 995 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 TYW1BQ6NUM6 668 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 VSIG10LQ86VR7 867 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 ZNF408Q9H9D4 720 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 FBXO2Q9UK22 296 aaPredicted RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 ZBTB12Q9Y330 459 aaPredicted RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 NYNRINQ9P2P1 1898 aaKnown RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 PTPDC1A2A3K4 754 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 RIMBP2O15034 1052 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 TLR2O60603 784 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 METAP2P50579 478 aaKnown RBP eCLIP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 TARBP2Q15633 366 aaKnown RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 PKN2Q16513 984 aaKnown RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 SRCAPQ6ZRS2 3230 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 NOSTRINQ8IVI9 506 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 CDAN1Q8IWY9 1227 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 CCDC24Q8N4L8 307 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 KLHDC9Q8NEP7 349 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 NUP210Q8TEM1 1887 aaPredicted RBP4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 AMNQ9BXJ7 453 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 TUFT1Q9NNX1 390 aa4.2□□□□□ -1.74
FNDC3A-202ENST00000398316 KCND1Q9NSA2 647 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms