RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MCTP2Q6DN12 878 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 ANO3Q9BYT9 981 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 MBD3O95983 291 aa31.34■■■□□ 2.61
CPNE1-203ENST00000397442 MCM7P33993 719 aa31.34■■■□□ 2.61
CPNE1-203ENST00000397442 GCOM1H8Y6P7 765 aaPredicted RBP31.33■■■□□ 2.61
CPNE1-203ENST00000397442 FOSP01100 380 aaPredicted RBP31.33■■■□□ 2.61
CPNE1-203ENST00000397442 POLR2MP0CAP2 368 aa31.33■■■□□ 2.61
CPNE1-203ENST00000397442 HSD17B4P51659 736 aa31.33■■■□□ 2.61
CPNE1-203ENST00000397442 ADALQ6DHV7 355 aa31.33■■■□□ 2.61
CPNE1-203ENST00000397442 SNRNP48Q6IEG0 339 aaKnown RBP31.33■■■□□ 2.61
CPNE1-203ENST00000397442 CRYGNQ8WXF5 182 aa31.33■■■□□ 2.61
CPNE1-203ENST00000397442 BRI3BPQ8WY22 251 aa31.33■■■□□ 2.61
CPNE1-203ENST00000397442 TEX13BQ9BXU2 312 aa31.33■■■□□ 2.61
CPNE1-203ENST00000397442 HOMER2Q9NSB8 354 aa31.33■■■□□ 2.61
CPNE1-203ENST00000397442 RBBP6Q7Z6E9 1792 aaKnown RBP31.33■■■□□ 2.61
CPNE1-203ENST00000397442 BMP15O95972 392 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 HERVK_113P62684 666 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 ATP2C1P98194 919 aaPredicted RBP31.32■■■□□ 2.6
CPNE1-203ENST00000397442 PTGDRQ13258 359 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 PABPC4Q13310 644 aaKnown RBP eCLIP31.32■■■□□ 2.64e-7■■■□□ 15.8
CPNE1-203ENST00000397442 LETM2Q2VYF4 491 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 MB21D1Q8N884 522 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 C4orf32Q8N8J7 132 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 JMYQ8N9B5 988 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 TRERF1Q96PN7 1200 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 BTBD7Q9P203 1132 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 FBXO2Q9UK22 296 aaPredicted RBP31.32■■■□□ 2.6
CPNE1-203ENST00000397442 CCL15-CCL14A0A0B4J2E2 113 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 CCL15Q16663 113 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 RASAL3Q86YV0 1011 aa31.32■■■□□ 2.6
CPNE1-203ENST00000397442 GOLGA6L4A6NEF3 574 aa31.31■■■□□ 2.6
CPNE1-203ENST00000397442 PEX10O60683 326 aa31.31■■■□□ 2.6
CPNE1-203ENST00000397442 TOMM70O94826 608 aa31.31■■■□□ 2.6
CPNE1-203ENST00000397442 RNF146Q9NTX7 359 aa31.31■■■□□ 2.6
CPNE1-203ENST00000397442 SPDYE3A6NKU9 549 aa31.3■■■□□ 2.6
CPNE1-203ENST00000397442 OSBPP22059 807 aa31.3■■■□□ 2.6
CPNE1-203ENST00000397442 PTPREP23469 700 aa31.3■■■□□ 2.6
CPNE1-203ENST00000397442 STAT3P40763 770 aa31.3■■■□□ 2.6
CPNE1-203ENST00000397442 MCF2L2Q86YR7 1114 aa31.3■■■□□ 2.6
CPNE1-203ENST00000397442 BTBD19C9JJ37 291 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 CCNT1O60563 726 aaKnown RBP31.29■■■□□ 2.6
CPNE1-203ENST00000397442 ZNF157P51786 506 aaPredicted RBP31.29■■■□□ 2.6
CPNE1-203ENST00000397442 KRI1Q8N9T8 703 aaKnown RBP31.29■■■□□ 2.6
CPNE1-203ENST00000397442 SLC45A1Q9Y2W3 748 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 TLL2Q9Y6L7 1015 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 A0A1W2PQ27 194 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 A0A1W2PQ64 194 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 A0A1W2PQD8 194 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 CNMDO75829 334 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 SREBF1P36956 1147 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 GRIN1Q05586 938 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 RGMBQ6NW40 437 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 FCHSD1Q86WN1 690 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 CLIC6Q96NY7 704 aa31.29■■■□□ 2.6
CPNE1-203ENST00000397442 SRPRBQ9Y5M8 271 aaKnown RBP31.29■■■□□ 2.6
CPNE1-203ENST00000397442 LIG1P18858 919 aa31.28■■■□□ 2.6
CPNE1-203ENST00000397442 PLS1Q14651 629 aa31.28■■■□□ 2.6
CPNE1-203ENST00000397442 TKFCQ3LXA3 575 aa31.28■■■□□ 2.6
CPNE1-203ENST00000397442 ANKRD23Q86SG2 305 aa31.28■■■□□ 2.6
CPNE1-203ENST00000397442 TMEM60Q9H2L4 133 aa31.28■■■□□ 2.6
CPNE1-203ENST00000397442 COL20A1Q9P218 1284 aa31.28■■■□□ 2.6
CPNE1-203ENST00000397442 CUTAO60888 179 aa31.27■■■□□ 2.6
CPNE1-203ENST00000397442 TDP2O95551 362 aa31.27■■■□□ 2.6
CPNE1-203ENST00000397442 ARHGAP4P98171 946 aa31.27■■■□□ 2.6
CPNE1-203ENST00000397442 ORC2Q13416 577 aaPredicted RBP31.27■■■□□ 2.6
CPNE1-203ENST00000397442 SAMD3Q8N6K7 520 aa31.27■■■□□ 2.6
CPNE1-203ENST00000397442 PTPN18Q99952 460 aa31.27■■■□□ 2.6
CPNE1-203ENST00000397442 GOLPH3LQ9H4A5 285 aa31.27■■■□□ 2.6
CPNE1-203ENST00000397442 MAP3K20Q9NYL2 800 aaKnown RBP31.27■■■□□ 2.6
CPNE1-203ENST00000397442 PDHXO00330 501 aa31.26■■■□□ 2.6
CPNE1-203ENST00000397442 USP11P51784 963 aa31.26■■■□□ 2.6
CPNE1-203ENST00000397442 PPP4R3AQ6IN85 833 aa31.26■■■□□ 2.6
CPNE1-203ENST00000397442 CCAR1Q8IX12 1150 aaKnown RBP31.26■■■□□ 2.6
CPNE1-203ENST00000397442 TXNRD2Q9NNW7 524 aa31.26■■■□□ 2.6
CPNE1-203ENST00000397442 RBPJLQ9UBG7 517 aa31.26■■■□□ 2.6
CPNE1-203ENST00000397442 SHC4Q6S5L8 630 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 TESPA1A2RU30 521 aaPredicted RBP31.25■■■□□ 2.59
CPNE1-203ENST00000397442 CYP2C8P10632 490 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 RPS6P62753 249 aaKnown RBP31.25■■■□□ 2.59
CPNE1-203ENST00000397442 IL17AQ16552 155 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 RIOX2Q8IUF8 465 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 FAM43AQ8N2R8 423 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 SYTL5Q8TDW5 730 aaPredicted RBP31.25■■■□□ 2.59
CPNE1-203ENST00000397442 FERMT2Q96AC1 680 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 SPATC1LQ9H0A9 340 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 PNMA3Q9UL41 463 aa31.25■■■□□ 2.59
CPNE1-203ENST00000397442 SLC37A4O43826 429 aa31.24■■■□□ 2.59
CPNE1-203ENST00000397442 NEMFO60524 1076 aa31.24■■■□□ 2.59
CPNE1-203ENST00000397442 CMA1P23946 247 aa31.24■■■□□ 2.59
CPNE1-203ENST00000397442 ARL6IP4Q66PJ3 421 aaKnown RBP31.24■■■□□ 2.59
CPNE1-203ENST00000397442 SLC30A10Q6XR72 485 aa31.24■■■□□ 2.59
CPNE1-203ENST00000397442 PAGR1Q9BTK6 254 aa31.24■■■□□ 2.59
CPNE1-203ENST00000397442 CYP3A7-CYP3A51PA0A087WV96 503 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 LAD1O00515 517 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 SLC10A3P09131 477 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 CYP3A7P24462 503 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 CAVIN1Q6NZI2 390 aaKnown RBP31.23■■■□□ 2.59
CPNE1-203ENST00000397442 FSIP1Q8NA03 581 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 MRPS27Q92552 414 aaKnown RBP31.23■■■□□ 2.59
CPNE1-203ENST00000397442 MBOAT7Q96N66 472 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms