RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 MMTAG2Q9BU76 263 aaKnown RBP21.54■■□□□ 1.04
CLDND1-203ENST00000394181 SH2D4AQ9H788 454 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 DDX25Q9UHL0 483 aaKnown RBP21.54■■□□□ 1.04
CLDND1-203ENST00000394181 TXLNAP40222 546 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 STAT6P42226 847 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 PPP4R3AQ6IN85 833 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 CHURC1Q8WUH1 139 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 HAS1Q92839 578 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 CCSER1Q9C0I3 900 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 RNF181Q9P0P0 153 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 CCDC39Q9UFE4 941 aa21.54■■□□□ 1.04
CLDND1-203ENST00000394181 HS1BP3Q53T59 392 aa21.53■■□□□ 1.04
CLDND1-203ENST00000394181 RRAGBQ5VZM2 374 aa21.53■■□□□ 1.04
CLDND1-203ENST00000394181 CABP7Q86V35 215 aa21.53■■□□□ 1.04
CLDND1-203ENST00000394181 IGSF22Q8N9C0 903 aa21.53■■□□□ 1.04
CLDND1-203ENST00000394181 RASSF8Q8NHQ8 419 aa21.53■■□□□ 1.04
CLDND1-203ENST00000394181 RANBP17Q9H2T7 1088 aaKnown RBP21.53■■□□□ 1.04
CLDND1-203ENST00000394181 FMR1Q06787 632 aaKnown RBP eCLIP21.53■■□□□ 1.04
CLDND1-203ENST00000394181 SMYD4Q8IYR2 804 aaPredicted RBP21.53■■□□□ 1.04
CLDND1-203ENST00000394181 MED15Q96RN5 788 aa21.53■■□□□ 1.04
CLDND1-203ENST00000394181 GLT8D2Q9H1C3 349 aa21.53■■□□□ 1.04
CLDND1-203ENST00000394181 MYH7BA7E2Y1 1941 aa21.52■■□□□ 1.04
CLDND1-203ENST00000394181 SMC2O95347 1197 aa21.52■■□□□ 1.04
CLDND1-203ENST00000394181 ORC2Q13416 577 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-203ENST00000394181 SARM1Q6SZW1 724 aa21.52■■□□□ 1.04
CLDND1-203ENST00000394181 CRYGNQ8WXF5 182 aa21.52■■□□□ 1.04
CLDND1-203ENST00000394181 NRBP1Q9UHY1 535 aa21.52■■□□□ 1.04
CLDND1-203ENST00000394181 POTEMA6NI47 508 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 PLCG1P19174 1290 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 MTMR2Q13614 643 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 APOBEC3FQ8IUX4 373 aaKnown RBP21.51■■□□□ 1.03
CLDND1-203ENST00000394181 AK8Q96MA6 479 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 FEM1BQ9UK73 627 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 SBF1O95248 1867 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 ATAD5Q96QE3 1844 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 ATP1A3P13637 1013 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 CD44P16070 742 aaKnown RBP21.51■■□□□ 1.03
CLDND1-203ENST00000394181 LMOD1P29536 600 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-203ENST00000394181 FAM43AQ8N2R8 423 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 WRNIP1Q96S55 665 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 NUDT12Q9BQG2 462 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 KIAA1683Q9H0B3 1180 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 TTC12Q9H892 705 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-203ENST00000394181 ZNF112Q9UJU3 913 aa21.51■■□□□ 1.03
CLDND1-203ENST00000394181 PLA2G6O60733 806 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 ARHGAP4P98171 946 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 SPP2Q13103 211 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 PRKG1Q13976 671 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 ZSCAN30Q86W11 494 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 TRMT44Q8IYL2 757 aaKnown RBP21.5■■□□□ 1.03
CLDND1-203ENST00000394181 EMILIN3Q9NT22 766 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 IKBKBO14920 756 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 FXR2P51116 673 aaKnown RBP eCLIP21.5■■□□□ 1.03
CLDND1-203ENST00000394181 FAM160B2Q86V87 743 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 FCHSD1Q86WN1 690 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 MLKLQ8NB16 471 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 CCDC34Q96HJ3 373 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 AGBL1Q96MI9 1066 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 LRWD1Q9UFC0 647 aa21.5■■□□□ 1.03
CLDND1-203ENST00000394181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.5■■□□□ 1.03
CLDND1-203ENST00000394181 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
CLDND1-203ENST00000394181 SMTNL1A8MU46 457 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 GTPBP6O43824 516 aaPredicted RBP21.49■■□□□ 1.03
CLDND1-203ENST00000394181 USP11P51784 963 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 MYL5Q02045 173 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 AP3B2Q13367 1082 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 DCAF15Q66K64 600 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 TRIML1Q8N9V2 468 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 GSDMAQ96QA5 445 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 PYM1Q9BRP8 204 aaKnown RBP21.49■■□□□ 1.03
CLDND1-203ENST00000394181 FANCLQ9NW38 375 aa21.49■■□□□ 1.03
CLDND1-203ENST00000394181 CFBP00751 764 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 HSP90AA4PQ58FG1 418 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 LDHDQ86WU2 507 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 SPDYE3A6NKU9 549 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 C9orf131Q5VYM1 1079 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 DRC7Q8IY82 874 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 SCYL3Q8IZE3 742 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 CYP2W1Q8TAV3 490 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 SSC5DA1L4H1 1573 aa21.48■■□□□ 1.03
CLDND1-203ENST00000394181 ZNF536O15090 1300 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 CYP3A7-CYP3A51PA0A087WV96 503 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 FAM86B1E9PN63 330 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 FAM86B2P0C5J1 330 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 PTPRAP18433 802 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 VCAM1P19320 739 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 CYP3A7P24462 503 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 GRB10Q13322 594 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 PNMA5Q96PV4 448 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 KBTBD4Q9NVX7 518 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-203ENST00000394181 PIK3CDO00329 1044 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 WDR46O15213 610 aaKnown RBP21.47■■□□□ 1.03
CLDND1-203ENST00000394181 COBLO75128 1261 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 GCFC2P16383 781 aaKnown RBP21.47■■□□□ 1.03
CLDND1-203ENST00000394181 SREBF1P36956 1147 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 PRR16Q569H4 304 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 MBOAT7Q96N66 472 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 TANGO6Q9C0B7 1094 aa21.47■■□□□ 1.03
CLDND1-203ENST00000394181 ZKSCAN5Q9Y2L8 839 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms