RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 MYO1AQ9UBC5 1043 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 CASP2P42575 452 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 ZC3H12BQ5HYM0 836 aaKnown RBP15.99■□□□□ 0.15
CCDC50-201ENST00000392455 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
CCDC50-201ENST00000392455 YARSP54577 528 aaKnown RBP15.99■□□□□ 0.15
CCDC50-201ENST00000392455 CALCRLQ16602 461 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 C6orf118Q5T5N4 469 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 XAGE2Q96GT9 111 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 PAMP19021 973 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 IL1RL1Q01638 556 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 MYCT1Q8N699 235 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 CCDC151A5D8V7 595 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 TCP10Q12799 353 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 KCNH3Q9ULD8 1083 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 SESN1Q9Y6P5 492 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 V9GY48 417 aaPredicted RBP15.99■□□□□ 0.15
CCDC50-201ENST00000392455 EFCAB8A8MWE9 144 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 EXOC3O60645 756 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 KRT19P08727 400 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 SRGAP2CP0DJJ0 459 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 ANO1Q5XXA6 986 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 NAF1Q96HR8 494 aaKnown RBP15.98■□□□□ 0.15
CCDC50-201ENST00000392455 ING2Q9H160 280 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 VAMP4O75379 141 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 DCTN3O75935 186 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 ZBTB8OSQ8IWT0 167 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 ZNF594Q96JF6 807 aaPredicted RBP15.98■□□□□ 0.15
CCDC50-201ENST00000392455 METTL14Q9HCE5 456 aaKnown RBP15.98■□□□□ 0.15
CCDC50-201ENST00000392455 CTDSPL2Q05D32 466 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 PTK2BQ14289 1009 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 BEND3Q5T5X7 828 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 MGARPQ8TDB4 240 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 PARVBQ9HBI1 364 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.98■□□□□ 0.15
CCDC50-201ENST00000392455 CD19P15391 556 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 HOXC9P31274 260 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 SUN2Q9UH99 717 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 PRKG1Q13976 671 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 PIP4K2CQ8TBX8 421 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 NCKAP5LQ9HCH0 1330 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 FBXW4P57775 412 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 TRIM31Q9BZY9 425 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 CUEDC2Q9H467 287 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
CCDC50-201ENST00000392455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCDC50-201ENST00000392455 WASHC5Q12768 1159 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 ZNF713Q8N859 430 aaPredicted RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 PLBD2Q8NHP8 589 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 NDEL1Q9GZM8 345 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 GNPTABQ3T906 1256 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 NCOA5Q9HCD5 579 aaKnown RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 RNF14Q9UBS8 474 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 ANGEL1Q9UNK9 670 aaKnown RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 EIF3BP55884 814 aaKnown RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 NR5A1Q13285 461 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 LAMC2Q13753 1193 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 ABTB1Q969K4 478 aaPredicted RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 EYA1Q99502 592 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 CPSF3Q9UKF6 684 aaKnown RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 TAF5LO75529 589 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 TMOD1P28289 359 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 KIF23Q02241 960 aaPredicted RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 HP1BP3Q5SSJ5 553 aaPredicted RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 SLFN12Q8IYM2 578 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 OLA1Q9NTK5 396 aaKnown RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 H0Y626 953 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 PDE8AO60658 829 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 TRIM16O95361 564 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 GCP02774 474 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 MMEP08473 750 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 EEF1GP26641 437 aaKnown RBP15.97■□□□□ 0.15
CCDC50-201ENST00000392455 ADCY7P51828 1080 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 TTC38Q5R3I4 469 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 TRIML2Q8N7C3 387 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 PGBD1Q96JS3 809 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 TSC22D3Q99576 134 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 COG4Q9H9E3 785 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 GPAA1O43292 621 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 PDE1BQ01064 536 aa15.97■□□□□ 0.15
CCDC50-201ENST00000392455 ZBED4O75132 1171 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 SCG3Q8WXD2 468 aaKnown RBP15.96■□□□□ 0.15
CCDC50-201ENST00000392455 MED10Q9BTT4 135 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 CPXCR1Q8N123 301 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 METTL22Q9BUU2 404 aaPredicted RBP15.96■□□□□ 0.15
CCDC50-201ENST00000392455 PRR23D1E9PI22 279 aaPredicted RBP15.96■□□□□ 0.15
CCDC50-201ENST00000392455 PRR23D2P0DMB1 279 aaPredicted RBP15.96■□□□□ 0.15
CCDC50-201ENST00000392455 TNNI1P19237 187 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 FSCBQ5H9T9 825 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 KRT26Q7Z3Y9 468 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 PARD3BQ8TEW8 1205 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 KIF17Q9P2E2 1029 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 GPATCH8Q9UKJ3 1502 aaKnown RBP15.96■□□□□ 0.15
CCDC50-201ENST00000392455 SLC1A4P43007 532 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 DPP8Q6V1X1 898 aaPredicted RBP15.96■□□□□ 0.15
CCDC50-201ENST00000392455 NUDCD1Q96RS6 583 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms