RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 NEMFO60524 1076 aa13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 CFBP00751 764 aa13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 HSP90AA2PQ14568 343 aaPredicted RBP13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 ARL6IP4Q66PJ3 421 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 CLMNQ96JQ2 1002 aa13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 GLT8D2Q9H1C3 349 aa13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 PP2D1A8MPX8 630 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 OR52Z1P0C646 297 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 SASS6Q6UVJ0 657 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 KRBA2Q6ZNG9 492 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 FCHSD1Q86WN1 690 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 ELP3Q9H9T3 547 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 RAVER2Q9HCJ3 691 aaKnown RBP13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 RRAGDQ9NQL2 400 aaPredicted RBP13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 SERTAD1Q9UHV2 236 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 CCPG1Q9ULG6 757 aa13.83□□□□□ -0.19
SPTBN1-203ENST00000389980 PAPPA2Q9BXP8 1791 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 PTPRFP10586 1907 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 RLFQ13129 1914 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 PNOCQ13519 176 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 MAP1SQ66K74 1059 aaPredicted RBP13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 GRAMD1CQ8IYS0 662 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 CNNM3Q8NE01 707 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 GJA10Q969M2 543 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 DHX58Q96C10 678 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 TIGD1Q96MW7 591 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 PPP1R9AQ9ULJ8 1098 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 CSADQ9Y600 493 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 WDR90Q96KV7 1748 aa13.83□□□□□ -0.2
SPTBN1-203ENST00000389980 IREB2P48200 963 aaKnown RBP13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 ANO6Q4KMQ2 910 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 ATG4CQ96DT6 458 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 SLC38A10Q9HBR0 1119 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 HOMER2Q9NSB8 354 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 SPDYE3A6NKU9 549 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 TRAF5O00463 557 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 BIN1O00499 593 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 ICAM1P05362 532 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 NF2P35240 595 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 TXKP42681 527 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 CALCRLQ16602 461 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
SPTBN1-203ENST00000389980 LAD1O00515 517 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 ACTN4O43707 911 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 ALAS1P13196 640 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 LONP1P36776 959 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 TECP42680 631 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 ARHGAP4P98171 946 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 AP3B2Q13367 1082 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 ISM2Q6H9L7 571 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 DNAJC25Q9H1X3 360 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 RRAGCQ9HB90 399 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 VWA5AO00534 786 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 NFIBO00712 420 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 PRPHP41219 470 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 UBXN2AP68543 259 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 KARSQ15046 597 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 ZRSR1Q15695 479 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 ZNF408Q9H9D4 720 aa13.81□□□□□ -0.2
SPTBN1-203ENST00000389980 GCOM1H8Y6P7 765 aaPredicted RBP13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 PIK3CDO00329 1044 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 IRF6O14896 467 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 POLR2MP0CAP2 368 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 TRAF1Q13077 416 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 MUM1L1Q5H9M0 696 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 PPP4R3AQ6IN85 833 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 C11orf57Q6ZUT1 292 aaPredicted RBP13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 CRYGNQ8WXF5 182 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 PLIN2Q99541 437 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 ABCB11O95342 1321 aa13.8□□□□□ -0.2
SPTBN1-203ENST00000389980 CASP1P29466 404 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 AFMP43652 599 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 CATSPERGQ6ZRH7 1159 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 ANKRD13AQ8IZ07 590 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 CLEC4DQ8WXI8 215 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 STAMQ92783 540 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 HAS1Q92839 578 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 ZBED4O75132 1171 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 FOSP01100 380 aaPredicted RBP13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 DSG3P32926 999 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 SREBF1P36956 1147 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 USP11P51784 963 aa13.79□□□□□ -0.2
SPTBN1-203ENST00000389980 ORC2Q13416 577 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms