RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 TUBB2AQ13885 445 aa22.74■■□□□ 1.23
CLN5-201ENST00000377453 TUBB2BQ9BVA1 445 aa22.74■■□□□ 1.23
CLN5-201ENST00000377453 ANKRD2Q9GZV1 360 aa22.74■■□□□ 1.23
CLN5-201ENST00000377453 IRS2Q9Y4H2 1338 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 LRRC41Q15345 812 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 MEA1Q16626 185 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 ANKRD13CQ8N6S4 541 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 RREB1Q92766 1687 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 TRIM66O15016 1216 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 TOM1O60784 492 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 IDEP14735 1019 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 FKBP15Q5T1M5 1219 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 SMARCC1Q92922 1105 aaPredicted RBP22.73■■□□□ 1.23
CLN5-201ENST00000377453 EYA3Q99504 573 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 NUDT12Q9BQG2 462 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 CAPN6Q9Y6Q1 641 aa22.73■■□□□ 1.23
CLN5-201ENST00000377453 COA7Q96BR5 231 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 NGLY1Q96IV0 654 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 TMEM51Q9NW97 253 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 SPATA31A5Q5VU36 1347 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 SPATA31A7Q8IWB4 1347 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 USP17L5A8MUK1 530 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 EIF3JO75822 258 aaKnown RBP22.72■■□□□ 1.23
CLN5-201ENST00000377453 CXCR5P32302 372 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 NONOQ15233 471 aaKnown RBP eCLIP22.72■■□□□ 1.23
CLN5-201ENST00000377453 DAGLBQ8NCG7 672 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 DHTKD1Q96HY7 919 aaPredicted RBP22.72■■□□□ 1.23
CLN5-201ENST00000377453 CDCA7Q9BWT1 371 aaPredicted RBP22.72■■□□□ 1.23
CLN5-201ENST00000377453 WNK3Q9BYP7 1800 aa22.72■■□□□ 1.23
CLN5-201ENST00000377453 POTEMA6NI47 508 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 ANKRD65E5RJM6 399 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 MATR3P43243 847 aaKnown RBP eCLIP22.71■■□□□ 1.23
CLN5-201ENST00000377453 CDK8P49336 464 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 GNAQP50148 359 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 CCDC96Q2M329 555 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 C2CD5Q86YS7 1000 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 HDAC7Q8WUI4 952 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 CEP95Q96GE4 821 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 MYMKA6NI61 221 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 KRT86O43790 486 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 SLC37A4O43826 429 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 ZPR1O75312 459 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 MOCS3O95396 460 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 TDP2O95551 362 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 CYLC1P35663 651 aaPredicted RBP22.71■■□□□ 1.23
CLN5-201ENST00000377453 BTDP43251 543 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 PAPD7Q5XG87 772 aaKnown RBP22.71■■□□□ 1.23
CLN5-201ENST00000377453 COG1Q8WTW3 980 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 ANKS1AQ92625 1134 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 ZMYND12Q9H0C1 365 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 FAM204AQ9H8W3 233 aa22.71■■□□□ 1.23
CLN5-201ENST00000377453 ZNHIT6Q9NWK9 470 aaKnown RBP22.71■■□□□ 1.23
CLN5-201ENST00000377453 TULP2O00295 520 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 KRT83P78385 493 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 ZBED6P86452 979 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 ARHGAP20Q9P2F6 1191 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 NARFQ9UHQ1 456 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 WDR93Q6P2C0 686 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 KCNK18Q7Z418 384 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 NEK8Q86SG6 692 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 MMRN2Q9H8L6 949 aa22.7■■□□□ 1.22
CLN5-201ENST00000377453 NCK2O43639 380 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 SYF2O95926 243 aaKnown RBP22.69■■□□□ 1.22
CLN5-201ENST00000377453 SLURP2P0DP57 97 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 ACTN2P35609 894 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 GRB10Q13322 594 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 HSP90B2PQ58FF3 399 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 SPTY2D1Q68D10 685 aaPredicted RBP22.69■■□□□ 1.22
CLN5-201ENST00000377453 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 BLOC1S4Q9NUP1 217 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 SNED1Q8TER0 1413 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 RNF40O75150 1001 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 APBA1Q02410 837 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 TPTE2Q6XPS3 522 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 TMC4Q7Z404 712 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 LRRC47Q8N1G4 583 aaKnown RBP22.69■■□□□ 1.22
CLN5-201ENST00000377453 C7orf25Q9BPX7 421 aa22.69■■□□□ 1.22
CLN5-201ENST00000377453 RTFDC1Q9BY42 306 aaPredicted RBP22.69■■□□□ 1.22
CLN5-201ENST00000377453 CCDC42Q96M95 316 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 PNMA5Q96PV4 448 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 NYXQ9GZU5 481 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 HPCAL4Q9UM19 191 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 EDIL3O43854 480 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 PRPHP41219 470 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 DNA2P51530 1060 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 SLC7A5Q01650 507 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 MUM1L1Q5H9M0 696 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 TMED8Q6PL24 325 aaPredicted RBP22.68■■□□□ 1.22
CLN5-201ENST00000377453 GBP3Q9H0R5 595 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 SALL4Q9UJQ4 1053 aa22.68■■□□□ 1.22
CLN5-201ENST00000377453 THRAP3Q9Y2W1 955 aaKnown RBP22.68■■□□□ 1.22
CLN5-201ENST00000377453 EIF3CLB5ME19 914 aaKnown RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 IPO7O95373 1038 aaKnown RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 EIF4A3P38919 411 aaKnown RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 NFRKBQ6P4R8 1299 aa22.67■■□□□ 1.22
CLN5-201ENST00000377453 KRT25Q7Z3Z0 450 aa22.67■■□□□ 1.22
CLN5-201ENST00000377453 AMOTL1Q8IY63 956 aa22.67■■□□□ 1.22
CLN5-201ENST00000377453 TEX11Q8IYF3 940 aa22.67■■□□□ 1.22
CLN5-201ENST00000377453 ARHGEF1Q92888 912 aaKnown RBP22.67■■□□□ 1.22
CLN5-201ENST00000377453 EIF3CQ99613 913 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms