RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LSM14BQ9BX40 385 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ARPP21Q9UBL0 812 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ERVV-1B6SEH8 477 aa15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 BTDP43251 543 aa15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 GTF2IP78347 998 aa15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TBX2Q13207 712 aaPredicted RBP15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 BEND6Q5SZJ8 279 aaPredicted RBP15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 POTEDQ86YR6 584 aa15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ZNF34Q8IZ26 560 aa15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TMEM47Q9BQJ4 181 aa15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PPANQ9NQ55 473 aaKnown RBP15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.14
TNFRSF1B-201ENST00000376259 LGALS16A8MUM7 142 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 GTF2A1P52655 376 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TBC1D9BQ66K14 1250 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KCTD1Q719H9 257 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SLC51AQ86UW1 340 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KRT12Q99456 494 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ADAMTS1Q9UHI8 967 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PCDHB13Q9Y5F0 798 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CACNA1FO60840 1977 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 RGPD2P0DJD1 1756 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SRCAPQ6ZRS2 3230 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SARSP49591 514 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KLHL30Q0D2K2 578 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SEC23AQ15436 765 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KIAA0753Q2KHM9 967 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SH2D3CQ8N5H7 860 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 UBLCP1Q8WVY7 318 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SELENOOQ9BVL4 669 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 BACH1O14867 736 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ABCB4P21439 1286 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 FGFR2P21802 821 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 FAM71BQ8TC56 605 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NSUN4Q96CB9 384 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 EPB41L5Q9HCM4 733 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TCEAL9Q9UHQ7 104 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KCNK3O14649 394 aa15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KIF11P52732 1056 aa15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 LRRC1Q9BTT6 524 aa15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TDP2O95551 362 aa15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PDCLQ13371 301 aa15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 DPP8Q6V1X1 898 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 RSRC2Q7L4I2 434 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NOX5Q96PH1 765 aa15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
TNFRSF1B-201ENST00000376259 APBA1Q02410 837 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TBC1D5Q92609 795 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 EHD4Q9H223 541 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ATP8A2Q9NTI2 1148 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ZBTB21Q9ULJ3 1066 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 LRRC53A6NM62 1247 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CCNE1P24864 410 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CACNB3P54284 484 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ZYXQ15942 572 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 FAM133AQ8N9E0 248 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 COG1Q8WTW3 980 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NDST4Q9H3R1 872 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NFU1Q9UMS0 254 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KIAA1024Q9UPX6 916 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 FMN2Q9NZ56 1722 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L5A8MUK1 530 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SLC9C1Q4G0N8 1177 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KRT25Q7Z3Z0 450 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ZNF804AQ7Z570 1209 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 HYOU1Q9Y4L1 999 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PNPLA7Q6ZV29 1317 aa15.93■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ATP8B1O43520 1251 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NFAT5O94916 1531 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 MEX3CQ5U5Q3 659 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 DPH5Q9H2P9 285 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 LTN1O94822 1766 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SFI1A8K8P3 1242 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 EEF1GP26641 437 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 OTUD6BQ8N6M0 293 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 HDAC7Q8WUI4 952 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PCDHA13Q9Y5I0 950 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 RIC1Q4ADV7 1423 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SLURP2P0DP57 97 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SSR1P43307 286 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ADCY7P51828 1080 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ZBED6P86452 979 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 DOK7Q18PE1 504 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ADSSL1Q8N142 457 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 FBXL16Q8N461 479 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CNBD1Q8NA66 436 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TRIM58Q8NG06 486 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 LARP4BQ92615 738 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NUP58Q9BVL2 599 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ANKRD2Q9GZV1 360 aa15.92■□□□□ 0.14
TNFRSF1B-201ENST00000376259 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 UBXN2AP68543 259 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PABPC4Q13310 644 aaKnown RBP eCLIP15.91■□□□□ 0.143e-6■■■□□ 18.8
TNFRSF1B-201ENST00000376259 CEP85LQ5SZL2 805 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms