RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 CAPN11Q9UMQ6 739 aa15.23■□□□□ 0.03
MCF2L-204ENST00000375608 MROH5Q6ZUA9 1318 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 LRRC53A6NM62 1247 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 PSMD14O00487 310 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 HNRNPH1P31943 449 aaKnown RBP15.22■□□□□ 0.03
MCF2L-204ENST00000375608 TMTC3Q6ZXV5 915 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 STAG2Q8N3U4 1231 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 SF3B2Q13435 895 aaKnown RBP15.22■□□□□ 0.03
MCF2L-204ENST00000375608 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 PKN1Q16512 942 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 APTXQ7Z2E3 356 aaKnown RBP15.22■□□□□ 0.03
MCF2L-204ENST00000375608 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-204ENST00000375608 AP1M1Q9BXS5 423 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 AKAP12Q02952 1782 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 NR1D1P20393 614 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 GBP2P32456 591 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-204ENST00000375608 ADSSL1Q8N142 457 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 ZIM3Q96PE6 472 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 SNX12Q9UMY4 172 aa15.22■□□□□ 0.03
MCF2L-204ENST00000375608 USP17L3A6NCW0 530 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 USP17L4A6NCW7 530 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 CTNNA1P35221 906 aaKnown RBP15.21■□□□□ 0.03
MCF2L-204ENST00000375608 LONP1P36776 959 aaKnown RBP15.21■□□□□ 0.03
MCF2L-204ENST00000375608 USP17L1Q7RTZ2 530 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 TBC1D5Q92609 795 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 TBC1D31Q96DN5 1066 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 BAIAP2L1Q9UHR4 511 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 SLIT1O75093 1534 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 EIF3HO15372 352 aaKnown RBP eCLIP15.21■□□□□ 0.039e-7■■□□□ 12.8
MCF2L-204ENST00000375608 PDE6BP35913 854 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 KRT71Q3SY84 523 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 ADGRA1Q86SQ6 560 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 DYDC1Q8WWB3 177 aa15.21■□□□□ 0.03
MCF2L-204ENST00000375608 RGPD8O14715 1765 aaPredicted RBP15.21■□□□□ 0.02
MCF2L-204ENST00000375608 CCNE1P24864 410 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 ATP6V1AP38606 617 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 SLC1A4P43007 532 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 KCNQ4P56696 695 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 AMPD2Q01433 879 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 KLHL30Q0D2K2 578 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 TXNRD1Q16881 649 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 SLC9C1Q4G0N8 1177 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 TSEN2Q8NCE0 465 aaKnown RBP15.21■□□□□ 0.02
MCF2L-204ENST00000375608 NDST4Q9H3R1 872 aa15.21■□□□□ 0.02
MCF2L-204ENST00000375608 FGFR1OPO95684 399 aaKnown RBP15.2■□□□□ 0.02
MCF2L-204ENST00000375608 CSF1RP07333 972 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 NAA25Q14CX7 972 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 ALX1Q15699 326 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 TMEM266Q2M3C6 531 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-204ENST00000375608 WDR59Q6PJI9 974 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 MTRQ99707 1265 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 LSM14BQ9BX40 385 aaKnown RBP15.2■□□□□ 0.02
MCF2L-204ENST00000375608 CD248Q9HCU0 757 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 MEGF6O75095 1541 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 ITIH6Q6UXX5 1313 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 NWD1Q149M9 1564 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 GCOM1H8Y6P7 765 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-204ENST00000375608 MYZAPP0CAP1 466 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 CNNM4Q6P4Q7 775 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
MCF2L-204ENST00000375608 VIPAS39Q9H9C1 493 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 PIK3C2AO00443 1686 aa15.2■□□□□ 0.02
MCF2L-204ENST00000375608 NRXN3Q9Y4C0 1643 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 PBX1P40424 430 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 IKQ13123 557 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-204ENST00000375608 SLC44A5Q8NCS7 719 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 SMCO2A6NFE2 343 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 PALMO75781 387 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 TNNC1P63316 161 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 SNX29Q8TEQ0 813 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
MCF2L-204ENST00000375608 NCAPGQ9BPX3 1015 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 ANKIB1Q9P2G1 1089 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 SMIM5Q71RC9 77 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 CCDC170Q8IYT3 715 aa15.19■□□□□ 0.02
MCF2L-204ENST00000375608 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-204ENST00000375608 TCRBV5S4A2TA0A5A2 114 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 ADAMTS3O15072 1205 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 SFMBT2Q5VUG0 894 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 CCDC25Q86WR0 208 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 THAP9Q9H5L6 903 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 PLAAQ9Y263 795 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 ABCC12Q96J65 1359 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 BUB1BO60566 1050 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-204ENST00000375608 RPS6KA1Q15418 735 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 PDXDC2PQ6P474 469 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 MAPKAPK5Q8IW41 473 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 FAM133AQ8N9E0 248 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-204ENST00000375608 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.18■□□□□ 0.02
MCF2L-204ENST00000375608 FAM153BP0C7A2 387 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 TMOD1P28289 359 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 FAM153CQ494X1 144 aa15.18■□□□□ 0.02
MCF2L-204ENST00000375608 KRT79Q5XKE5 535 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms