RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CD320Q9NPF0 282 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 TNFRSF10DQ9UBN6 386 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 PPT2Q9UMR5 302 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 MINPP1Q9UNW1 487 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 CLTCL1P53675 1640 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 PTPRTO14522 1441 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 FANCAO15360 1455 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 IFT172Q9UG01 1749 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 SHOXO15266 292 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 SEMA7AO75326 666 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 GSNP06396 782 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 SOX9P48436 509 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 ANKRD39Q53RE8 183 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 SPOCD1Q6ZMY3 1216 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 CEP128Q6ZU80 1094 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 PPFIBP1Q86W92 1011 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 C1QL4Q86Z23 238 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 ZSCAN18Q8TBC5 510 aaPredicted RBP6.43□□□□□ -1.38
USP48-202ENST00000374730 MRRFQ96E11 262 aaKnown RBP6.43□□□□□ -1.38
USP48-202ENST00000374730 CARD11Q9BXL7 1154 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 ZNF552Q9H707 407 aaPredicted RBP6.43□□□□□ -1.38
USP48-202ENST00000374730 KIDINS220Q9ULH0 1771 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 ZBED9Q6R2W3 1325 aa6.43□□□□□ -1.38
USP48-202ENST00000374730 KIF1BO60333 1816 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 FAM86C2PA6NEL3 165 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 TCAF2A6NFQ2 919 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 FADS2P1A8MWK0 482 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 HRKO00198 91 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 ETV2O00321 342 aaPredicted RBP6.42□□□□□ -1.38
USP48-202ENST00000374730 EFEMP2O95967 443 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 CFPP27918 469 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 PDE6BP35913 854 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 FBXW10Q5XX13 1052 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 UNC5AQ6ZN44 842 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 ZNF605Q86T29 641 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 LRRC56Q8IYG6 542 aaPredicted RBP6.42□□□□□ -1.38
USP48-202ENST00000374730 GPRASP2Q96D09 838 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 DSCC1Q9BVC3 393 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 MCOLN1Q9GZU1 580 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 KCNK12Q9HB15 430 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 GINM1Q9NU53 330 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 SLC12A7Q9Y666 1083 aa6.42□□□□□ -1.38
USP48-202ENST00000374730 SPAG9O60271 1321 aaKnown RBP6.42□□□□□ -1.38
USP48-202ENST00000374730 ADGRL1O94910 1474 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 EFCAB6Q5THR3 1501 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 LMTK2Q8IWU2 1503 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 OR14I1A6ND48 311 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 VAV1P15498 845 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 GJA8P48165 433 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 RTP1P59025 263 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
USP48-202ENST00000374730 ZYXQ15942 572 aaKnown RBP6.41□□□□□ -1.38
USP48-202ENST00000374730 KCNA10Q16322 511 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 TDRD10Q5VZ19 366 aaKnown RBP6.41□□□□□ -1.38
USP48-202ENST00000374730 GALNT18Q6P9A2 607 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 CRTC3Q6UUV7 619 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 ZPBP2Q6X784 338 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 C19orf47Q8N9M1 422 aaKnown RBP6.41□□□□□ -1.38
USP48-202ENST00000374730 OR6P1Q8NGX9 317 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 KCNN1Q92952 543 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 ERVK13-1Q9NX77 482 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 ZNF214Q9UL59 606 aaPredicted RBP6.41□□□□□ -1.38
USP48-202ENST00000374730 FHOD1Q9Y613 1164 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 ASXL2Q76L83 1435 aa6.41□□□□□ -1.38
USP48-202ENST00000374730 ZMYM4Q5VZL5 1548 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 TEX51A0A1B0GUA7 166 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 MYOCOSA0A1B0GUC4 107 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 WTIPA6NIX2 430 aaPredicted RBP6.4□□□□□ -1.38
USP48-202ENST00000374730 NPIPB6E9PJ23 425 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 MEIS1O00470 390 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 PNLIPP16233 465 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 CCDC184Q52MB2 194 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 AXDND1Q5T1B0 1012 aaPredicted RBP6.4□□□□□ -1.38
USP48-202ENST00000374730 ERICH6BQ5W0A0 696 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 DCAF15Q66K64 600 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 CWF19L1Q69YN2 538 aaKnown RBP6.4□□□□□ -1.38
USP48-202ENST00000374730 RUFY4Q6ZNE9 571 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 SLCO6A1Q86UG4 719 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 NT5DC4Q86YG4 428 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 SIAH1Q8IUQ4 282 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 CRBNQ96SW2 442 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 CDADC1Q9BWV3 514 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
USP48-202ENST00000374730 GP6Q9HCN6 339 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 EFR3BQ9Y2G0 817 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.4□□□□□ -1.38
USP48-202ENST00000374730 GPR55Q9Y2T6 319 aaPredicted RBP6.4□□□□□ -1.38
USP48-202ENST00000374730 TAF6LQ9Y6J9 622 aa6.4□□□□□ -1.38
USP48-202ENST00000374730 PPRC1Q5VV67 1664 aaKnown RBP6.39□□□□□ -1.39
USP48-202ENST00000374730 ST20-MTHFSA0A0A6YYL1 179 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 A0A1W2PQ45 241 aaPredicted RBP6.39□□□□□ -1.39
USP48-202ENST00000374730 A0A1W2PQY0 241 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 CD247P20963 164 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 GIPRP48546 466 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 EIF6P56537 245 aaKnown RBP6.39□□□□□ -1.39
USP48-202ENST00000374730 ERVFRD-1P60508 538 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 HSF5Q4G112 596 aaPredicted RBP6.39□□□□□ -1.39
USP48-202ENST00000374730 FBLN7Q53RD9 439 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 RTP2Q5QGT7 225 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms