RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 MUM1L1Q5H9M0 696 aa16.61■□□□□ 0.25
RCC1-201ENST00000373831 ATL3Q6DD88 541 aa16.61■□□□□ 0.25
RCC1-201ENST00000373831 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
RCC1-201ENST00000373831 RTEL1Q9NZ71 1219 aa16.61■□□□□ 0.25
RCC1-201ENST00000373831 MRPL11Q9Y3B7 192 aaKnown RBP16.61■□□□□ 0.25
RCC1-201ENST00000373831 CCDC194A0A1B0GVG4 234 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 NFIBO00712 420 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 EDIL3O43854 480 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 ALAS1P13196 640 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 RILPL1Q5EBL4 403 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 SNRNP48Q6IEG0 339 aaKnown RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 CTU1Q7Z7A3 348 aaKnown RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 ANKRD23Q86SG2 305 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 TMEM87AQ8NBN3 555 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 LEO1Q8WVC0 666 aaPredicted RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 PCDHB6Q9Y5E3 794 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 ZNFX1Q9P2E3 1918 aaKnown RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 PIK3CDO00329 1044 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 PDHXO00330 501 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 CYP2C8P10632 490 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 OSBPP22059 807 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 HOXA13P31271 388 aaPredicted RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 PABPC4Q13310 644 aaKnown RBP eCLIP16.6■□□□□ 0.251e-8■■□□□ 11.9
RCC1-201ENST00000373831 PTPAQ15257 358 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 INF2Q27J81 1249 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 ANO1Q5XXA6 986 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 KRT25Q7Z3Z0 450 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 TEX13BQ9BXU2 312 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 GLT8D2Q9H1C3 349 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 TXNRD2Q9NNW7 524 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 HOMER2Q9NSB8 354 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 RCOR1Q9UKL0 485 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 SLC45A1Q9Y2W3 748 aa16.6■□□□□ 0.25
RCC1-201ENST00000373831 CTDP1Q9Y5B0 961 aaPredicted RBP16.6■□□□□ 0.25
RCC1-201ENST00000373831 PRPF40AO75400 957 aaKnown RBP16.59■□□□□ 0.25
RCC1-201ENST00000373831 ATP2B1P20020 1258 aa16.59■□□□□ 0.25
RCC1-201ENST00000373831 GHRHRQ02643 423 aa16.59■□□□□ 0.25
RCC1-201ENST00000373831 NONOQ15233 471 aaKnown RBP eCLIP16.59■□□□□ 0.254e-6■■□□□ 12.4
RCC1-201ENST00000373831 SF3A1Q15459 793 aaKnown RBP16.59■□□□□ 0.25
RCC1-201ENST00000373831 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
RCC1-201ENST00000373831 LINC00301Q8NCQ3 95 aa16.59■□□□□ 0.25
RCC1-201ENST00000373831 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
RCC1-201ENST00000373831 RBPJLQ9UBG7 517 aa16.59■□□□□ 0.25
RCC1-201ENST00000373831 CFBP00751 764 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 STAT3P40763 770 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 TM4SF4P48230 202 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 HSD17B4P51659 736 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 TBCKQ8TEA7 893 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 SPATA32Q96LK8 384 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.24
RCC1-201ENST00000373831 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.58■□□□□ 0.24
RCC1-201ENST00000373831 RNF146Q9NTX7 359 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 PNMA2Q9UL42 364 aa16.58■□□□□ 0.24
RCC1-201ENST00000373831 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
RCC1-201ENST00000373831 IGF2BP3O00425 579 aaKnown RBP eCLIP16.57■□□□□ 0.24
RCC1-201ENST00000373831 GADD45BO75293 160 aaPredicted RBP16.57■□□□□ 0.24
RCC1-201ENST00000373831 POLR2MP0CAP2 368 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 SOX10P56693 466 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 PLS1Q14651 629 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 TTC38Q5R3I4 469 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
RCC1-201ENST00000373831 CRYGNQ8WXF5 182 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 PAGR1Q9BTK6 254 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 COL20A1Q9P218 1284 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
RCC1-201ENST00000373831 ELP1O95163 1332 aa16.57■□□□□ 0.24
RCC1-201ENST00000373831 MANSC4A6NHS7 340 aaPredicted RBP16.56■□□□□ 0.24
RCC1-201ENST00000373831 DDX11L8A8MPP1 907 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 YEATS4O95619 227 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 AP3B2Q13367 1082 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 Q3C1V9 767 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 SPATC1LQ9H0A9 340 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 PNMA3Q9UL41 463 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
RCC1-201ENST00000373831 ZNF174Q15697 407 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 SLC30A10Q6XR72 485 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 NEK8Q86SG6 692 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 RABGAP1Q9Y3P9 1069 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 PLXNB2O15031 1838 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 SREBF2Q12772 1141 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 STK38Q15208 465 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 MCF2L2Q86YR7 1114 aa16.55■□□□□ 0.24
RCC1-201ENST00000373831 MOV10L1Q9BXT6 1211 aaKnown RBP16.55■□□□□ 0.24
RCC1-201ENST00000373831 GPR25O00155 361 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms