RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CTAGE6Q86UF2 777 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CTAGE4Q8IX94 777 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 HERC5Q9UII4 1024 aaKnown RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 RPAP1Q9BWH6 1393 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 AKR1B15C9JRZ8 316 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 IGSF22Q8N9C0 903 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CACTINQ8WUQ7 758 aaKnown RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 NLRP4Q96MN2 994 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 TTC14Q96N46 770 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 SUGT1Q9Y2Z0 365 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 UTYO14607 1347 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 CAMTA2O94983 1202 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 PDIA3P30101 505 aaKnown RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 ITPK1Q13572 414 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 PPP2R5DQ14738 602 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 SLC9C1Q4G0N8 1177 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 CCDC186Q7Z3E2 898 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 PAIP2Q9BPZ3 127 aaKnown RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 TAB2Q9NYJ8 693 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 SRGAP2CP0DJJ0 459 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 SCYL2Q6P3W7 929 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 NSUN6Q8TEA1 469 aaKnown RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 NUP58Q9BVL2 599 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 SLITRK6Q9H5Y7 841 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 GSPT1P15170 499 aaKnown RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 RPS12P25398 132 aaKnown RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 CALCOCO2Q13137 446 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 PTGDRQ13258 359 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 ZNF589Q86UQ0 364 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 UBL4BQ8N7F7 174 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 PI4K2BQ8TCG2 481 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 MIS12Q9H081 205 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 ADALQ6DHV7 355 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 CCDC25Q86WR0 208 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 COL23A1Q86Y22 540 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 MYO1AQ9UBC5 1043 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 NBPF26B4DH59 902 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 STAT3P40763 770 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 NBPF10Q6P3W6 841 aaKnown RBP11.84□□□□□ -0.51
PTPRK-205ENST00000368213 NBPF15Q8N660 670 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 ACAD9Q9H845 621 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 LZTFL1Q9NQ48 299 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 DISC1Q9NRI5 854 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
PTPRK-205ENST00000368213 TRIM50Q86XT4 487 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 SRRTQ9BXP5 876 aaKnown RBP11.83□□□□□ -0.52
PTPRK-205ENST00000368213 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 UNC13BO14795 1591 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 LAD1O00515 517 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 SEC24BO95487 1268 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 LONP1P36776 959 aaKnown RBP11.83□□□□□ -0.52
PTPRK-205ENST00000368213 KARSQ15046 597 aaKnown RBP11.83□□□□□ -0.52
PTPRK-205ENST00000368213 CCL15Q16663 113 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 CCDC122Q5T0U0 273 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-205ENST00000368213 INPP5FQ9Y2H2 1132 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 ASB14A6NK59 587 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 HSF2BPO75031 334 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 TGFB2P61812 414 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 RBM10P98175 930 aaKnown RBP11.83□□□□□ -0.52
PTPRK-205ENST00000368213 KLHL30Q0D2K2 578 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 MTMR2Q13614 643 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 FAM26FQ5R3K3 315 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 CTR9Q6PD62 1173 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
PTPRK-205ENST00000368213 KIF9Q9HAQ2 790 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 ANXA13P27216 316 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 NT5C2P49902 561 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 OSTNP61366 133 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 RCSD1Q6JBY9 416 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 GJA10Q969M2 543 aa11.83□□□□□ -0.52
PTPRK-205ENST00000368213 FAM84BQ96KN1 310 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-205ENST00000368213 SYNJ2BP-COX16A0A087WUM0 186 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 SHTN1A0MZ66 631 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 STAM2O75886 525 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 XPAP23025 273 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 KIF11P52732 1056 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 PRAMEF18Q5VWM3 479 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 FAM167AQ96KS9 214 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 COX16Q9P0S2 106 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 DNAI1Q9UI46 699 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CETPP11597 493 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 ABCD1P33897 745 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 NAP1L3Q99457 506 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 MYOZ2Q9NPC6 264 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms