RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 ADCY4Q8NFM4 1077 aa7.94□□□□□ -1.14
RNU4-40P-201ENST00000364351 RNF34Q969K3 372 aa7.94□□□□□ -1.14
RNU4-40P-201ENST00000364351 SH3D21A4FU49 640 aa7.93□□□□□ -1.14
RNU4-40P-201ENST00000364351 CBFA2T2O43439 604 aa7.93□□□□□ -1.14
RNU4-40P-201ENST00000364351 DDX1Q92499 740 aaKnown RBP7.93□□□□□ -1.14
RNU4-40P-201ENST00000364351 RWDD3Q9Y3V2 267 aa7.93□□□□□ -1.14
RNU4-40P-201ENST00000364351 LTBP3Q9NS15 1303 aa7.93□□□□□ -1.14
RNU4-40P-201ENST00000364351 K7ESM1 405 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 VAMP4O75379 141 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 INSRRP14616 1297 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 PMLP29590 882 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 EEF1DP3Q658K8 133 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 RCSD1Q6JBY9 416 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 B3GNT8Q7Z7M8 397 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 LZTR1Q8N653 840 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 MCMBPQ9BTE3 642 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 BACH2Q9BYV9 841 aa7.92□□□□□ -1.14
RNU4-40P-201ENST00000364351 STXBP3O00186 592 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 AURKAO14965 403 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 DLX2Q07687 328 aaPredicted RBP7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 DPY19L1Q2PZI1 675 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 GNPTABQ3T906 1256 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 HHIPL2Q6UWX4 724 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 CCDC81Q6ZN84 652 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 ADAT2Q7Z6V5 191 aaKnown RBP7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 CARFQ8N187 725 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 CRBNQ96SW2 442 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 HAUS7Q99871 368 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 WHRNQ9P202 907 aa7.91□□□□□ -1.14
RNU4-40P-201ENST00000364351 FANCCQ00597 558 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 HEATR6Q6AI08 1181 aaKnown RBP7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 CPNE8Q86YQ8 564 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 SMARCC2Q8TAQ2 1214 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 TSPAN17Q96FV3 270 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 NOX5Q96PH1 765 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 GPR20Q99678 358 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 FBLN5Q9UBX5 448 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 DUSP10Q9Y6W6 482 aa7.9□□□□□ -1.14
RNU4-40P-201ENST00000364351 PPP1R11O60927 126 aaPredicted RBP7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 ZNF16P17020 682 aaPredicted RBP7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 CNR2P34972 360 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 SEPHS1P49903 392 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 PUM1Q14671 1186 aaKnown RBP eCLIP7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 USP33Q8TEY7 942 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 PEX11GQ96HA9 241 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 FGD4Q96M96 766 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 GBP3Q9H0R5 595 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 TMPRSS5Q9H3S3 457 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 GULP1Q9UBP9 304 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 NUDT5Q9UKK9 219 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 PCDHB10Q9UN67 800 aa7.89□□□□□ -1.15
RNU4-40P-201ENST00000364351 NOBOXO60393 691 aa7.88□□□□□ -1.15
RNU4-40P-201ENST00000364351 GJA9P57773 515 aa7.88□□□□□ -1.15
RNU4-40P-201ENST00000364351 RACK1P63244 317 aaKnown RBP7.88□□□□□ -1.15
RNU4-40P-201ENST00000364351 ZNF827Q17R98 1081 aa7.88□□□□□ -1.15
RNU4-40P-201ENST00000364351 NETO2Q8NC67 525 aa7.88□□□□□ -1.15
RNU4-40P-201ENST00000364351 KLHL25Q9H0H3 589 aa7.88□□□□□ -1.15
RNU4-40P-201ENST00000364351 PALD1Q9ULE6 856 aa7.88□□□□□ -1.15
RNU4-40P-201ENST00000364351 C2orf71A6NGG8 1288 aa7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 PPM1BO75688 479 aa7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 SARSP49591 514 aaKnown RBP7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 TRIM26Q12899 539 aaPredicted RBP7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 SLC9A5Q14940 896 aa7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 ZBTB8AQ96BR9 441 aa7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 METTL5Q9NRN9 209 aaKnown RBP7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 GINM1Q9NU53 330 aa7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 CNOT11Q9UKZ1 510 aaKnown RBP7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 BACE2Q9Y5Z0 518 aa7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 SLC12A7Q9Y666 1083 aa7.87□□□□□ -1.15
RNU4-40P-201ENST00000364351 EPHX1P07099 455 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 AMPD2Q01433 879 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 SLC7A5Q01650 507 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 CACNB2Q08289 660 aaPredicted RBP7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 TTLL7Q6ZT98 887 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 CPA5Q8WXQ8 436 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 MTA3Q9BTC8 594 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 LNPKQ9C0E8 428 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 SPATA6Q9NWH7 488 aaPredicted RBP7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 NTMQ9P121 344 aa7.86□□□□□ -1.15
RNU4-40P-201ENST00000364351 ZBTB7AO95365 584 aa7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 PAMP19021 973 aa7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 SMAD4Q13485 552 aaKnown RBP7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 DDX11Q96FC9 970 aa7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 PHAXQ9H814 394 aaKnown RBP7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 CGGBP1Q9UFW8 167 aaPredicted RBP7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 DDX41Q9UJV9 622 aaKnown RBP7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 SUGT1Q9Y2Z0 365 aa7.85□□□□□ -1.15
RNU4-40P-201ENST00000364351 NPHP3-ACAD11A0A0J9YXS1 232 aa7.84□□□□□ -1.15
RNU4-40P-201ENST00000364351 EIF6P56537 245 aaKnown RBP7.84□□□□□ -1.15
RNU4-40P-201ENST00000364351 COL9A2Q14055 689 aaPredicted RBP7.84□□□□□ -1.15
RNU4-40P-201ENST00000364351 WWC2Q6AWC2 1192 aa7.84□□□□□ -1.15
RNU4-40P-201ENST00000364351 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
RNU4-40P-201ENST00000364351 MYRFQ9Y2G1 1151 aa7.84□□□□□ -1.15
RNU4-40P-201ENST00000364351 SIT1Q9Y3P8 196 aa7.84□□□□□ -1.15
RNU4-40P-201ENST00000364351 A0A1W2PQH9 124 aa7.83□□□□□ -1.16
RNU4-40P-201ENST00000364351 SMARCA5O60264 1052 aaPredicted RBP7.83□□□□□ -1.16
RNU4-40P-201ENST00000364351 NPHS1O60500 1241 aa7.83□□□□□ -1.16
RNU4-40P-201ENST00000364351 FUCA1P04066 466 aa7.83□□□□□ -1.16
RNU4-40P-201ENST00000364351 NTRK1P04629 796 aa7.83□□□□□ -1.16
RNU4-40P-201ENST00000364351 MAGEA10P43363 369 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms