RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 FOXD4L3Q6VB84 417 aaPredicted RBP23.63■■□□□ 1.37
SHISA4-201ENST00000362011 MB21D1Q8N884 522 aa23.63■■□□□ 1.37
SHISA4-201ENST00000362011 AGBL1Q96MI9 1066 aa23.63■■□□□ 1.37
SHISA4-201ENST00000362011 GBP4Q96PP9 640 aa23.63■■□□□ 1.37
SHISA4-201ENST00000362011 P2RX7Q99572 595 aaKnown RBP23.63■■□□□ 1.37
SHISA4-201ENST00000362011 PTCH2Q9Y6C5 1203 aa23.63■■□□□ 1.37
SHISA4-201ENST00000362011 TAL1P17542 331 aaPredicted RBP23.62■■□□□ 1.37
SHISA4-201ENST00000362011 TNFRSF25Q93038 417 aa23.62■■□□□ 1.37
SHISA4-201ENST00000362011 PSTPIP2Q9H939 334 aa23.62■■□□□ 1.37
SHISA4-201ENST00000362011 PLXNB2O15031 1838 aa23.62■■□□□ 1.37
SHISA4-201ENST00000362011 M0R2N6 131 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 PDHXO00330 501 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 ADAMTS3O15072 1205 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 TLR2O60603 784 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 BAG4O95429 457 aaKnown RBP23.61■■□□□ 1.37
SHISA4-201ENST00000362011 ALAS1P13196 640 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 FAM173BQ6P4H8 233 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 CLEC17AQ6ZS10 378 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 REXO1Q8N1G1 1221 aaKnown RBP23.61■■□□□ 1.37
SHISA4-201ENST00000362011 ZNF214Q9UL59 606 aaPredicted RBP23.61■■□□□ 1.37
SHISA4-201ENST00000362011 PCDHA6Q9UN73 950 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 PCDHA8Q9Y5H6 950 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 LCTP09848 1927 aa23.61■■□□□ 1.37
SHISA4-201ENST00000362011 TMEM132BQ14DG7 1078 aa23.6■■□□□ 1.37
SHISA4-201ENST00000362011 MYSM1Q5VVJ2 828 aa23.6■■□□□ 1.37
SHISA4-201ENST00000362011 TEX2Q8IWB9 1127 aa23.6■■□□□ 1.37
SHISA4-201ENST00000362011 RASGRP4Q8TDF6 673 aa23.6■■□□□ 1.37
SHISA4-201ENST00000362011 GTF3C2Q8WUA4 911 aaPredicted RBP23.6■■□□□ 1.37
SHISA4-201ENST00000362011 ZNF396Q96N95 335 aaPredicted RBP23.6■■□□□ 1.37
SHISA4-201ENST00000362011 TMEM106CQ9BVX2 250 aa23.6■■□□□ 1.37
SHISA4-201ENST00000362011 CCDC194A0A1B0GVG4 234 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 DNM1Q05193 864 aaKnown RBP23.59■■□□□ 1.37
SHISA4-201ENST00000362011 UBE2SQ16763 222 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 TKFCQ3LXA3 575 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 SLC9C1Q4G0N8 1177 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 SNRNP48Q6IEG0 339 aaKnown RBP23.59■■□□□ 1.37
SHISA4-201ENST00000362011 KRT25Q7Z3Z0 450 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 TEX13BQ9BXU2 312 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 BIN2Q9UBW5 565 aaPredicted RBP23.59■■□□□ 1.37
SHISA4-201ENST00000362011 OPLAHO14841 1288 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 CLK2P49760 499 aaKnown RBP23.59■■□□□ 1.37
SHISA4-201ENST00000362011 LACTBP83111 547 aaPredicted RBP23.59■■□□□ 1.37
SHISA4-201ENST00000362011 PLS1Q14651 629 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 ATL3Q6DD88 541 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 MCTP2Q6DN12 878 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 PAGR1Q9BTK6 254 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 BTBD7Q9P203 1132 aa23.59■■□□□ 1.37
SHISA4-201ENST00000362011 NOL7Q9UMY1 257 aaKnown RBP23.59■■□□□ 1.37
SHISA4-201ENST00000362011 PLXNA1Q9UIW2 1896 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 GNRH1P01148 92 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 NCLP19338 710 aaKnown RBP23.58■■□□□ 1.36
SHISA4-201ENST00000362011 STAT3P40763 770 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 KRT85P78386 507 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 JAKMIP3Q5VZ66 844 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 PIK3AP1Q6ZUJ8 805 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 RNF146Q9NTX7 359 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 TMEM260Q9NX78 707 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 RABGAP1Q9Y3P9 1069 aa23.58■■□□□ 1.36
SHISA4-201ENST00000362011 FAM205CA6NFA0 338 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 MEIS2O14770 477 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 NONOQ15233 471 aaKnown RBP eCLIP23.57■■□□□ 1.36
SHISA4-201ENST00000362011 RILPL1Q5EBL4 403 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 MUM1L1Q5H9M0 696 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 EARS2Q5JPH6 523 aaKnown RBP23.57■■□□□ 1.36
SHISA4-201ENST00000362011 POTEEQ6S8J3 1075 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 MCF2L2Q86YR7 1114 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 SAMD3Q8N6K7 520 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 SMCR8Q8TEV9 937 aaPredicted RBP23.57■■□□□ 1.36
SHISA4-201ENST00000362011 CLEC4DQ8WXI8 215 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 CHAMP1Q96JM3 812 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 TRERF1Q96PN7 1200 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 PARK7Q99497 189 aaKnown RBP23.57■■□□□ 1.36
SHISA4-201ENST00000362011 ARHGAP39Q9C0H5 1083 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 HOMER2Q9NSB8 354 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 CFAP45Q9UL16 551 aa23.57■■□□□ 1.36
SHISA4-201ENST00000362011 MGAMO43451 1857 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 GCOM1H8Y6P7 765 aaPredicted RBP23.56■■□□□ 1.36
SHISA4-201ENST00000362011 PIK3CDO00329 1044 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 CNMDO75829 334 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 CFBP00751 764 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 POLR2MP0CAP2 368 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 CYP2C8P10632 490 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 PRMT2P55345 433 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 AP3B2Q13367 1082 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 USP17L6PQ6QN14 398 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 RIOX2Q8IUF8 465 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 CNPY2Q9Y2B0 182 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 RIPK3Q9Y572 518 aa23.56■■□□□ 1.36
SHISA4-201ENST00000362011 NFIBO00712 420 aa23.55■■□□□ 1.36
SHISA4-201ENST00000362011 GCLCP48506 637 aaPredicted RBP23.55■■□□□ 1.36
SHISA4-201ENST00000362011 C17orf99Q6UX52 265 aa23.55■■□□□ 1.36
SHISA4-201ENST00000362011 SPATC1LQ9H0A9 340 aa23.55■■□□□ 1.36
SHISA4-201ENST00000362011 MAP3K20Q9NYL2 800 aaKnown RBP23.55■■□□□ 1.36
SHISA4-201ENST00000362011 TFIP11Q9UBB9 837 aaKnown RBP23.55■■□□□ 1.36
SHISA4-201ENST00000362011 RBPJLQ9UBG7 517 aa23.55■■□□□ 1.36
SHISA4-201ENST00000362011 ZSWIM8A7E2V4 1837 aa23.54■■□□□ 1.36
SHISA4-201ENST00000362011 FOSP01100 380 aaPredicted RBP23.54■■□□□ 1.36
SHISA4-201ENST00000362011 COPB2P35606 906 aa23.54■■□□□ 1.36
SHISA4-201ENST00000362011 TRAPPC10P48553 1259 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms