RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 FMR1NBQ8N0W7 255 aaPredicted RBP7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 IL31RAQ8NI17 732 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 MTFR1LQ9H019 292 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 NLRC4Q9NPP4 1024 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 FAM207AQ9NSI2 230 aaPredicted RBP7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 TCP11L1Q9NUJ3 509 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 DDX25Q9UHL0 483 aaKnown RBP7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 PRR12Q9ULL5 1215 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 TUBGCP6Q96RT7 1819 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 LAMB4A4D0S4 1761 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 MYH13Q9UKX3 1938 aa7.05□□□□□ -1.28
CX3CR1-201ENST00000358309 NUP98P52948 1817 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 FSD2A1L4K1 749 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 GOLGA8IPA6NC78 632 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 GOLGA8JA6NMD2 632 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 TMCO5BA8MYB1 307 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 CALCAP01258 141 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 BMP6P22004 513 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 MATR3P43243 847 aaKnown RBP eCLIP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 CNTN2Q02246 1040 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 KCNA1Q09470 495 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 TBC1D8BQ0IIM8 1120 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 DPYDQ12882 1025 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 PFKFB3Q16875 520 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 DCAF17Q5H9S7 520 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 CEP135Q66GS9 1140 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 LMBRD2Q68DH5 695 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 CABP7Q86V35 215 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 SMCR8Q8TEV9 937 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 KCNB2Q92953 911 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 LLPHQ9BRT6 129 aaKnown RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 FGFBP2Q9BYJ0 223 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 RPAP3Q9H6T3 665 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 SUGCTQ9HAC7 445 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 DDX19AQ9NUU7 478 aaKnown RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 MYH2Q9UKX2 1941 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 STXBP3O00186 592 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 N4BP3O15049 544 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 TMEM62Q0P6H9 643 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 HERC4Q5GLZ8 1057 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 MUM1L1Q5H9M0 696 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 PLA2G4FQ68DD2 849 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 KRBA2Q6ZNG9 492 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 PROCA1Q8NCQ7 364 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 CACTINQ8WUQ7 758 aaKnown RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 LENG1Q96BZ8 264 aaPredicted RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 RRAGCQ9HB90 399 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 NMRK2Q9NPI5 230 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 GPRC5CQ9NQ84 441 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 GON4LQ3T8J9 2241 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 UBR2Q8IWV8 1755 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 KNL1Q8NG31 2342 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 SPEF2Q9C093 1822 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 TXLNAP40222 546 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 PMS1P54277 932 aaKnown RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 NPEPPSP55786 919 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 ECM1Q16610 540 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 STX1AQ16623 288 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 RILPL1Q5EBL4 403 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 TRIM50Q86XT4 487 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 SIAH1Q8IUQ4 282 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 RTKN2Q8IZC4 609 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 LRRC15Q8TF66 581 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 SPIRE2Q8WWL2 714 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 BHMT2Q9H2M3 363 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 MAN1B1Q9UKM7 699 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 PCDHA4Q9UN74 947 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 PCDHA12Q9UN75 941 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 PCDHB13Q9Y5F0 798 aa7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 MRPL42Q9Y6G3 142 aaKnown RBP7.04□□□□□ -1.28
CX3CR1-201ENST00000358309 SKILP12757 684 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 STAT2P52630 851 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 ZNF543Q08ER8 600 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 GRIPAP1Q4V328 841 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 SNRNP48Q6IEG0 339 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 ANKRD35Q8N283 1001 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 GDAP1L1Q96MZ0 367 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 SRRTQ9BXP5 876 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 RNF26Q9BY78 433 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 WDR11Q9BZH6 1224 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 ANO10Q9NW15 660 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 BCCIPQ9P287 314 aaKnown RBP eCLIP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 FBXO2Q9UK22 296 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 RGL2O15211 777 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 PRPF3O43395 683 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 USO1O60763 962 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 PRPF6O94906 941 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 ARP10275 920 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 MTIF2P46199 727 aaKnown RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 PTPAQ15257 358 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 ZC2HC1CQ53FD0 456 aaPredicted RBP7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 BRAPQ7Z569 592 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 NEK8Q86SG6 692 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 PAGE5Q96GU1 130 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 PHF20Q9BVI0 1012 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 SPEGQ15772 3267 aa7.03□□□□□ -1.28
CX3CR1-201ENST00000358309 CCDC169A6NNP5 214 aa7.02□□□□□ -1.29
CX3CR1-201ENST00000358309 GJB1P08034 283 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms