RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MTX1Q13505 466 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ZBTB10Q96DT7 871 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 TRIM11Q96F44 468 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CBX8Q9HC52 389 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 SYTL2Q9HCH5 934 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 MYO16Q9Y6X6 1858 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 SNUPNO95149 360 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 RPN1P04843 607 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 ATN1P54259 1190 aaPredicted RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 TUBA4AP68366 448 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CEP85Q6P2H3 762 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 MLKLQ8NB16 471 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 PARD3BQ8TEW8 1205 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 RGS20O76081 388 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 ESRRAP11474 423 aaPredicted RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 NNTQ13423 1086 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 WTAPQ15007 396 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 IFIT1BQ5T764 474 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 CDKL2Q92772 493 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 KAT14Q9H8E8 782 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 FANCEQ9HB96 536 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 TPD52L2O43399 206 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 E2F6O75461 281 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 NSFP46459 744 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 NCBP1Q09161 790 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 C2CD5Q86YS7 1000 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 RTL3Q8N8U3 475 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 ZNF483Q8TF39 744 aaPredicted RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 CHMP6Q96FZ7 201 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 LLPHQ9BRT6 129 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 C6orf50Q9HD87 102 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 STK24Q9Y6E0 443 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 CFAP74Q9C0B2 1584 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 FAM25AB3EWG3 89 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 FAM25CB3EWG5 89 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 FAM25GB3EWG6 89 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 H0Y3Z8 333 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 ORC4O43929 436 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 PDE6BP35913 854 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 TBL3Q12788 808 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 CAVIN4Q5BKX8 364 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 NANOGNBQ7Z5D8 188 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 DHX58Q96C10 678 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 NAF1Q96HR8 494 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 KCNA2P16389 499 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 RARSP54136 660 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 TFAP4Q01664 338 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 DSG1Q02413 1049 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 POSTNQ15063 836 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 LETM2Q2VYF4 491 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 DTHD1Q6ZMT9 781 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 NOSTRINQ8IVI9 506 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 GIPC2Q8TF65 315 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 RPAP3Q9H6T3 665 aaPredicted RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 COG4Q9H9E3 785 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 ZNF277Q9NRM2 450 aaPredicted RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 ZFP69BQ9UJL9 534 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 EIF2B2P49770 351 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 PLCD1P51178 756 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 EHD2Q9NZN4 543 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 TRIM17Q9Y577 477 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 ZNF202O95125 648 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 DLGAP3O95886 979 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 PDE1BQ01064 536 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 KLC3Q6P597 504 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 CRLF3Q8IUI8 442 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 DDHD1Q8NEL9 900 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 B4GALNT2Q8NHY0 566 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 SCYL1Q96KG9 808 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 BRIP1Q9BX63 1249 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 ATAD3AQ9NVI7 634 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 ARL2BPQ9Y2Y0 163 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 CROCC2H7BZ55 1655 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 EIF3DO15371 548 aaKnown RBP eCLIP6.68□□□□□ -1.34
VCAN-203ENST00000343200 SUPT3HO75486 399 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 SOX6P35712 828 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 PPARDQ03181 441 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 C8orf34Q49A92 452 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 MFSD4BQ5TF39 518 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 RAB44Q7Z6P3 723 aaPredicted RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 NAP1L4Q99733 375 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 KLC2Q9H0B6 622 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 RGL1Q9NZL6 768 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 ATP6V1HQ9UI12 483 aa6.68□□□□□ -1.34
VCAN-203ENST00000343200 BZW2Q9Y6E2 419 aaKnown RBP6.68□□□□□ -1.34
VCAN-203ENST00000343200 KCNK3O14649 394 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 PRPF6O94906 941 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 CCND1P24385 295 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 HSPA9P38646 679 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 IFNAR2P48551 515 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 KPNA2P52292 529 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 RAD23BP54727 409 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 ETF1P62495 437 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 CCDC117Q8IWD4 279 aaPredicted RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 HDAC11Q96DB2 347 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 TMEM245Q9H330 911 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 ACTN1P12814 892 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 BFSP2Q13515 415 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 MORF4L2Q15014 288 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 DCUN1D2Q6PH85 259 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms