RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 NUCB2P80303 420 aa20.5■□□□□ 0.87
SDCBP2-201ENST00000339987 A1CFQ9NQ94 594 aaKnown RBP20.5■□□□□ 0.87
SDCBP2-201ENST00000339987 PFASO15067 1338 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 BTBD18B2RXH4 712 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 ADAMTS3O15072 1205 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 BRD1O95696 1058 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 ZSCAN22P10073 491 aaPredicted RBP20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 U2AF2P26368 475 aaKnown RBP eCLIP20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 PKP1Q13835 747 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 UBE2SQ16763 222 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 NOM1Q5C9Z4 860 aaKnown RBP20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 NSMFQ6X4W1 530 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 RNF207Q6ZRF8 634 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 CCAR1Q8IX12 1150 aaKnown RBP20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 ABRAQ8N0Z2 381 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 OXER1Q8TDS5 423 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 TBC1D5Q92609 795 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 TNFRSF25Q93038 417 aa20.49■□□□□ 0.87
SDCBP2-201ENST00000339987 STRNO43815 780 aa20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 RPS6P62753 249 aaKnown RBP20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 AP3B2Q13367 1082 aa20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 USP17L6PQ6QN14 398 aa20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 MMP19Q99542 508 aa20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 CYP39A1Q9NYL5 469 aa20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 PCDHA6Q9UN73 950 aa20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 PCDHA8Q9Y5H6 950 aa20.48■□□□□ 0.87
SDCBP2-201ENST00000339987 FOSP01100 380 aaPredicted RBP20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 FCER1AP12319 257 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 NR5A1Q13285 461 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 BAATQ14032 418 aaPredicted RBP20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 KCTD2Q14681 263 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 WDR78Q5VTH9 848 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 MCTP1Q6DN14 999 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 SLC30A10Q6XR72 485 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 KRT25Q7Z3Z0 450 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 GPR142Q7Z601 462 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 PLEKHH3Q7Z736 793 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 ANKRD35Q8N283 1001 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 SYTL5Q8TDW5 730 aaPredicted RBP20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 BEGAINQ9BUH8 593 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 CHMP5Q9NZZ3 219 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 BIN2Q9UBW5 565 aaPredicted RBP20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 ZDHHC9Q9Y397 364 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 ZNF236Q9UL36 1845 aa20.47■□□□□ 0.87
SDCBP2-201ENST00000339987 KIF28PB7ZC32 967 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 HOXA13P31271 388 aaPredicted RBP20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 RESTQ13127 1097 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 NOSTRINQ8IVI9 506 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 RASGRP4Q8TDF6 673 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 ZSCAN16Q9H4T2 348 aaPredicted RBP20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 TMEM260Q9NX78 707 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 IVNS1ABPQ9Y6Y0 642 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 PLXNB2O15031 1838 aa20.46■□□□□ 0.87
SDCBP2-201ENST00000339987 GPR25O00155 361 aa20.45■□□□□ 0.86
SDCBP2-201ENST00000339987 PTPREP23469 700 aa20.45■□□□□ 0.86
SDCBP2-201ENST00000339987 SP3Q02447 781 aa20.45■□□□□ 0.86
SDCBP2-201ENST00000339987 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
SDCBP2-201ENST00000339987 COL20A1Q9P218 1284 aa20.45■□□□□ 0.86
SDCBP2-201ENST00000339987 DNAJC25-GNG10A0A024R161 153 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 CCDC194A0A1B0GVG4 234 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 SLC15A5A6NIM6 579 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 SPDYE3A6NKU9 549 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 F13A1P00488 732 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 LACTBP83111 547 aaPredicted RBP20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 GRB14Q14449 540 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 FERMT3Q86UX7 667 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 FRMPD4Q14CM0 1322 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 POTEB2H3BUK9 544 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 FCGRTP55899 365 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 NONOQ15233 471 aaKnown RBP eCLIP20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 FCHSD1Q86WN1 690 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 JMYQ8N9B5 988 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 FAM133AQ8N9E0 248 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 ANO3Q9BYT9 981 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 EHMT1Q9H9B1 1298 aa20.44■□□□□ 0.86
SDCBP2-201ENST00000339987 RPTORQ8N122 1335 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 MGAMO43451 1857 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 LCTP09848 1927 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 ADORA2AP29274 412 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 KIF22Q14807 665 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 EARS2Q5JPH6 523 aaKnown RBP20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 MORN1Q5T089 497 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 PIK3AP1Q6ZUJ8 805 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 DNERQ8NFT8 737 aa20.43■□□□□ 0.86
SDCBP2-201ENST00000339987 TNPO2O14787 897 aaKnown RBP20.42■□□□□ 0.86
SDCBP2-201ENST00000339987 SREBF1P36956 1147 aa20.42■□□□□ 0.86
SDCBP2-201ENST00000339987 TAAR1Q96RJ0 339 aa20.42■□□□□ 0.86
SDCBP2-201ENST00000339987 ZNFX1Q9P2E3 1918 aaKnown RBP20.42■□□□□ 0.86
SDCBP2-201ENST00000339987 FAM205CA6NFA0 338 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 FKTNO75072 461 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 CTGFP29279 349 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 PSMC4P43686 418 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 CNTN2Q02246 1040 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 FOXD4L5Q5VV16 416 aaPredicted RBP20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 CRYGNQ8WXF5 182 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 SOCS4Q8WXH5 440 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 FOXD4L4Q8WXT5 416 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms