RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PCDHA13Q9Y5I0 950 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 LRRC53A6NM62 1247 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 MARCH6O60337 910 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
SCARB1-202ENST00000339570 PPFIA4O75335 1185 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 PRPF6O94906 941 aaKnown RBP17.94■□□□□ 0.46
SCARB1-202ENST00000339570 MAGEA1P43355 309 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 KIF11P52732 1056 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 NELFCDQ8IXH7 590 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 CDK5RAP3Q96JB5 506 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 MINPP1Q9UNW1 487 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 BACH1O14867 736 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 SRGNP10124 158 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 C4orf32Q8N8J7 132 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 CCDC47Q96A33 483 aaKnown RBP17.94■□□□□ 0.46
SCARB1-202ENST00000339570 NSUN4Q96CB9 384 aaKnown RBP17.94■□□□□ 0.46
SCARB1-202ENST00000339570 ARHGAP20Q9P2F6 1191 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 PDS5AQ29RF7 1337 aaKnown RBP17.94■□□□□ 0.46
SCARB1-202ENST00000339570 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
SCARB1-202ENST00000339570 EEF1GP26641 437 aaKnown RBP17.93■□□□□ 0.46
SCARB1-202ENST00000339570 HPDP32754 393 aaPredicted RBP17.93■□□□□ 0.46
SCARB1-202ENST00000339570 RCSD1Q6JBY9 416 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 KLHL7Q8IXQ5 586 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 SPATA4Q8NEY3 305 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 CAPS2Q9BXY5 557 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 IL17RBQ9NRM6 502 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 NFU1Q9UMS0 254 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 POTEMA6NI47 508 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 CYTH3O43739 400 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 CALML3P27482 149 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 MAGEA9P43362 315 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 IRAK1P51617 712 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 ZBED6P86452 979 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 RBM12Q9NTZ6 932 aaKnown RBP17.93■□□□□ 0.46
SCARB1-202ENST00000339570 CHD4Q14839 1912 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 ITPK1Q13572 414 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 C8orf74Q6P047 294 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 ZNF444Q8N0Y2 327 aaPredicted RBP17.93■□□□□ 0.46
SCARB1-202ENST00000339570 BCCIPQ9P287 314 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCARB1-202ENST00000339570 COL18A1P39060 1754 aa17.93■□□□□ 0.46
SCARB1-202ENST00000339570 FRMPD2Q68DX3 1309 aaPredicted RBP17.93■□□□□ 0.46
SCARB1-202ENST00000339570 SLC1A4P43007 532 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 GUCY2DQ02846 1103 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 SLC35G1Q2M3R5 365 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 PAPD7Q5XG87 772 aaKnown RBP17.92■□□□□ 0.46
SCARB1-202ENST00000339570 INTS5Q6P9B9 1019 aaKnown RBP17.92■□□□□ 0.46
SCARB1-202ENST00000339570 CLEC10AQ8IUN9 316 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 TRIM9Q9C026 710 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 MKRN1Q9UHC7 482 aaKnown RBP17.92■□□□□ 0.46
SCARB1-202ENST00000339570 JRKLQ9Y4A0 524 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 H0YHG0 523 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 EBAG9O00559 213 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 ATP2C2O75185 946 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 VAV2P52735 878 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 GIMAP8Q8ND71 665 aaPredicted RBP17.92■□□□□ 0.46
SCARB1-202ENST00000339570 OSBPL9Q96SU4 736 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 ALS2Q96Q42 1657 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 TNS2Q63HR2 1409 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 COL1A1P02452 1464 aaPredicted RBP17.92■□□□□ 0.46
SCARB1-202ENST00000339570 SMCO2A6NFE2 343 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 NTSR2O95665 410 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 FAM153BP0C7A2 387 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 PPP2R5BQ15173 497 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 FAM153CQ494X1 144 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 CREG2Q8IUH2 290 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 EHBP1Q8NDI1 1231 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 CCDC43Q96MW1 224 aaKnown RBP17.92■□□□□ 0.46
SCARB1-202ENST00000339570 SEMA6BQ9H3T3 888 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 THAP9Q9H5L6 903 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 FAM153AQ9UHL3 310 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 SNX12Q9UMY4 172 aa17.92■□□□□ 0.46
SCARB1-202ENST00000339570 ERVV-1B6SEH8 477 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 KLRF2D3W0D1 207 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 KCNQ2O43526 872 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 CCNE1P24864 410 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 PAFAH1B1P43034 410 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 RNF187Q5TA31 235 aaPredicted RBP17.91■□□□□ 0.46
SCARB1-202ENST00000339570 SH3RF3Q8TEJ3 882 aaPredicted RBP17.91■□□□□ 0.46
SCARB1-202ENST00000339570 EPB41L5Q9HCM4 733 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 ANAPC4Q9UJX5 808 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 TAF1P21675 1872 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 NDUFAB1O14561 156 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 CARSP49589 748 aaKnown RBP17.91■□□□□ 0.46
SCARB1-202ENST00000339570 HLTFQ14527 1009 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCARB1-202ENST00000339570 CT47A1Q5JQC4 288 aaPredicted RBP17.91■□□□□ 0.46
SCARB1-202ENST00000339570 MAATS1Q7Z4T9 603 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 COA7Q96BR5 231 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 BRIP1Q9BX63 1249 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 FAM169AQ9Y6X4 670 aa17.91■□□□□ 0.46
SCARB1-202ENST00000339570 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 FECHP22830 423 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 HIBADHP31937 336 aaKnown RBP17.9■□□□□ 0.46
SCARB1-202ENST00000339570 NOP2P46087 812 aaKnown RBP17.9■□□□□ 0.46
SCARB1-202ENST00000339570 GUCY1A3Q02108 690 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 GRIK5Q16478 980 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 MIIPQ5JXC2 388 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 KIAA0895Q8NCT3 520 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 TBCKQ8TEA7 893 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 HSF2BPO75031 334 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms