RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 K7ENM7 598 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 GNGT1P63211 74 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 BRDTQ58F21 947 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 KANSL2Q9H9L4 492 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 RESP18Q5W5W9 173 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 CNKSR1Q969H4 720 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 C1orf112Q9NSG2 853 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 RNF14Q9UBS8 474 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 ADGRB3O60242 1522 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 ALAS1P13196 640 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 ARL1P40616 181 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 EHHADHQ08426 723 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 DOK7Q18PE1 504 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 PAGE5Q96GU1 130 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 IVNS1ABPQ9Y6Y0 642 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 STK10O94804 968 aaKnown RBP18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 GBP1P32455 592 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 SEPT2Q15019 361 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 MAP7D1Q3KQU3 841 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 XKR9Q5GH70 373 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 ODR4Q5SWX8 454 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 EPSTI1Q96J88 318 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 THAP9Q9H5L6 903 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 TESPA1A2RU30 521 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 ARMCX5Q6P1M9 558 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 SPATS2Q86XZ4 545 aaKnown RBP18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 FNBP4Q8N3X1 1017 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 PDE11AQ9HCR9 933 aa18.74■□□□□ 0.59
TRAPPC11-201ENST00000334690 GAP43P17677 238 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 RASSF7Q02833 373 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 GOLGA8FQ08AF8 430 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 GOLGA8DPQ0D2H9 430 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 SUSD4Q5VX71 490 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 BCAS4Q8TDM0 211 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 CAPS2Q9BXY5 557 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 A0A1B0GUA9 196 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 RNF40O75150 1001 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 CDC25AP30304 524 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 PPM1KQ8N3J5 372 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 P3H4Q92791 437 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 SPATA31A3Q5VYP0 1347 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 LMNB1P20700 586 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 PSMD2Q13200 908 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 PABPC4Q13310 644 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 FAM102BQ5T8I3 360 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 GRK7Q8WTQ7 553 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 MRRFQ96E11 262 aaKnown RBP18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 PSMD1Q99460 953 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 PLEKHA4Q9H4M7 779 aa18.73■□□□□ 0.59
TRAPPC11-201ENST00000334690 ENC1O14682 589 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 FMR1NBQ8N0W7 255 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 CYP2E1P05181 493 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 GUCY2DQ02846 1103 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 ALX1Q15699 326 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 PPP1R21Q6ZMI0 780 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 PIGSQ96S52 555 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 AS3MTQ9HBK9 375 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 PPANQ9NQ55 473 aaKnown RBP18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 NDUFA10O95299 355 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 TMTC3Q6ZXV5 915 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
TRAPPC11-201ENST00000334690 USP17L8P0C7I0 530 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 PDE6CP51160 858 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 LRCH2Q5VUJ6 765 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 PNMA8AQ86V59 439 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 WDR11Q9BZH6 1224 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 JRKLQ9Y4A0 524 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 CROCC2H7BZ55 1655 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 CYP2D7A0A087X1C5 515 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 COBLO75128 1261 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 APBA3O96018 575 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 P4HA1P13674 534 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 LIG4P49917 911 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 MECOMQ03112 1051 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 ARHGEF16Q5VV41 709 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 MB21D2Q8IYB1 491 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 CCDC89Q8N998 374 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 TRPC6Q9Y210 931 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 ABCA6Q8N139 1617 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 ITIH3Q06033 890 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 TRIM28Q13263 835 aaKnown RBP18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 GLG1Q92896 1179 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 BPIFA3Q9BQP9 254 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 SH3GLB2Q9NR46 395 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 GINS2Q9Y248 185 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 AXIN2Q9Y2T1 843 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 CIB2O75838 187 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 KRT19P08727 400 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 DCAF15Q66K64 600 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 CACNA2D3Q8IZS8 1091 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 TRIM6Q9C030 488 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 DISC1Q9NRI5 854 aa18.71■□□□□ 0.59
TRAPPC11-201ENST00000334690 STX2P32856 288 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 TBC1D10CQ8IV04 446 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 GABPB2Q8TAK5 448 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 CCDC127Q96BQ5 260 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 DHX36Q9H2U1 1008 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms