RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 IQSEC1Q6DN90 963 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 NOL8Q76FK4 1167 aaKnown RBP32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 EEPD1Q7L9B9 569 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 FBXO16Q8IX29 292 aaPredicted RBP32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 CTCFLQ8NI51 663 aaPredicted RBP32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 NEK1Q96PY6 1258 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 UPF3AQ9H1J1 476 aaKnown RBP32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 LCTP09848 1927 aa32.08■■■□□ 2.73
ATPAF1-201ENST00000329231 C6orf222P0C671 652 aaPredicted RBP32.08■■■□□ 2.73
ATPAF1-201ENST00000329231 CST5P28325 142 aaPredicted RBP32.08■■■□□ 2.73
ATPAF1-201ENST00000329231 GJA9P57773 515 aa32.08■■■□□ 2.73
ATPAF1-201ENST00000329231 RTP1P59025 263 aa32.08■■■□□ 2.73
ATPAF1-201ENST00000329231 C11orf97A0A1B0GVM6 126 aaPredicted RBP32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 MOXD2PA6NHM9 499 aa32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 PDE4DQ08499 809 aa32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 COL9A3Q14050 684 aaPredicted RBP32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 KRT32Q14532 448 aa32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 TAPT1Q6NXT6 567 aa32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 HOMER1Q86YM7 354 aa32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 PCSK9Q8NBP7 692 aaKnown RBP32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 PCDHA1Q9Y5I3 950 aa32.07■■■□□ 2.72
ATPAF1-201ENST00000329231 SYN1P17600 705 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 SNX17Q15036 470 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 KCNA10Q16322 511 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 SLC35G1Q2M3R5 365 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 C1orf53Q5VUE5 145 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 TBC1D5Q92609 795 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 PIGSQ96S52 555 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 MYL10Q9BUA6 226 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 PDGFCQ9NRA1 345 aa32.06■■■□□ 2.72
ATPAF1-201ENST00000329231 A0A1W2PQ45 241 aaPredicted RBP32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 A0A1W2PQY0 241 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 CYTH3O43739 400 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 CALM1P0DP23 149 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 CALM2P0DP24 149 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 CALM3P0DP25 149 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 ACLYP53396 1101 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 CCSAPQ6IQ19 270 aaPredicted RBP32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 RASEFQ8IZ41 740 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 SYTL5Q8TDW5 730 aaPredicted RBP32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 LZTS2Q9BRK4 669 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 LRRC2Q9BYS8 371 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 GNEQ9Y223 722 aaKnown RBP32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 ATP11BQ9Y2G3 1177 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 SLC12A7Q9Y666 1083 aa32.05■■■□□ 2.72
ATPAF1-201ENST00000329231 PNMA6FA0A0J9YX94 578 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 MYADML2A6NDP7 307 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 PPP1R11O60927 126 aaPredicted RBP32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 REC8O95072 547 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 SMPD1P17405 629 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 EDNRBP24530 442 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 GNAQP50148 359 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 NKX3-2P78367 333 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 GNASQ5JWF2 1037 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 Q9Y3F1 56 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 MYH6P13533 1939 aa32.04■■■□□ 2.72
ATPAF1-201ENST00000329231 SMARCA1P28370 1054 aa32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 DHX32Q7L7V1 743 aaKnown RBP32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 TLK2Q86UE8 772 aa32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 NSUN6Q8TEA1 469 aaKnown RBP32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 SPZ1Q9BXG8 430 aa32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 AP5M1Q9H0R1 490 aa32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 RBM27Q9P2N5 1060 aaKnown RBP32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 LRRC37A2A6NM11 1700 aa32.03■■■□□ 2.72
ATPAF1-201ENST00000329231 CFBP00751 764 aa32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 TRIM60Q495X7 471 aa32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 SGMS1Q86VZ5 419 aa32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 SAMD3Q8N6K7 520 aa32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 TAAR1Q96RJ0 339 aa32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 PRO3102Q9H379 93 aa32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 STARD7Q9NQZ5 370 aa32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 MAP3K20Q9NYL2 800 aaKnown RBP32.02■■■□□ 2.72
ATPAF1-201ENST00000329231 HMGB1P09429 215 aaKnown RBP32.01■■■□□ 2.71
ATPAF1-201ENST00000329231 EXOSC10Q01780 885 aaKnown RBP32.01■■■□□ 2.71
ATPAF1-201ENST00000329231 ADCK5Q3MIX3 580 aa32.01■■■□□ 2.71
ATPAF1-201ENST00000329231 RMDN3Q96TC7 470 aa32.01■■■□□ 2.71
ATPAF1-201ENST00000329231 WDR11Q9BZH6 1224 aa32.01■■■□□ 2.71
ATPAF1-201ENST00000329231 COL20A1Q9P218 1284 aa32.01■■■□□ 2.71
ATPAF1-201ENST00000329231 PRKAG2Q9UGJ0 569 aa32.01■■■□□ 2.71
ATPAF1-201ENST00000329231 RBM47A0AV96 593 aaKnown RBP32■■■□□ 2.71
ATPAF1-201ENST00000329231 DYNC1LI2O43237 492 aaPredicted RBP32■■■□□ 2.71
ATPAF1-201ENST00000329231 ASGR1P07306 291 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 HSD17B4P51659 736 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 IRX5P78411 483 aaPredicted RBP32■■■□□ 2.71
ATPAF1-201ENST00000329231 GHRHRQ02643 423 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 DUSP28Q4G0W2 176 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 SYNE3Q6ZMZ3 975 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 KCNB2Q92953 911 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 RRP36Q96EU6 259 aaKnown RBP32■■■□□ 2.71
ATPAF1-201ENST00000329231 GLT1D1Q96MS3 346 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 IWS1Q96ST2 819 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 GDF15Q99988 308 aa32■■■□□ 2.71
ATPAF1-201ENST00000329231 OPLAHO14841 1288 aa31.99■■■□□ 2.71
ATPAF1-201ENST00000329231 CTAGE5O15320 804 aa31.99■■■□□ 2.71
ATPAF1-201ENST00000329231 HSPA4P34932 840 aa31.99■■■□□ 2.71
ATPAF1-201ENST00000329231 ELP1O95163 1332 aa31.99■■■□□ 2.71
ATPAF1-201ENST00000329231 ZEB2O60315 1214 aa31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 RXRAP19793 462 aa31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 MAGEA10P43363 369 aaPredicted RBP31.98■■■□□ 2.71
ATPAF1-201ENST00000329231 FSCN1Q16658 493 aaKnown RBP31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms