RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 GNASQ5JWF2 1037 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 ANKRD33Q7Z3H0 272 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 TLK2Q86UE8 772 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 FBXO11Q86XK2 927 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 MTMR8Q96EF0 704 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 TOX2Q96NM4 488 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 PURBQ96QR8 312 aaKnown RBP24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 PDLIM7Q9NR12 457 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 MAD2L2Q9UI95 211 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 MRPL11Q9Y3B7 192 aaKnown RBP24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 LAMA3Q16787 3333 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 MROH7Q68CQ1 1323 aa24.82■■□□□ 1.56
UBE2D3-201ENST00000321805 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.81■■□□□ 1.56
UBE2D3-201ENST00000321805 ASGR1P07306 291 aa24.81■■□□□ 1.56
UBE2D3-201ENST00000321805 TLE2Q04725 743 aa24.81■■□□□ 1.56
UBE2D3-201ENST00000321805 TRAF1Q13077 416 aa24.81■■□□□ 1.56
UBE2D3-201ENST00000321805 NOL8Q76FK4 1167 aaKnown RBP24.81■■□□□ 1.56
UBE2D3-201ENST00000321805 STAG2Q8N3U4 1231 aa24.81■■□□□ 1.56
UBE2D3-201ENST00000321805 AMNQ9BXJ7 453 aa24.81■■□□□ 1.56
UBE2D3-201ENST00000321805 RBM47A0AV96 593 aaKnown RBP24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 CTAGE5O15320 804 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 CABYRO75952 493 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 SMPD1P17405 629 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 MDM2Q00987 491 aaPredicted RBP24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 TROAPQ12815 778 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 TMEM67Q5HYA8 995 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 CASC1Q6TDU7 716 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 EEPD1Q7L9B9 569 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 AP5M1Q9H0R1 490 aa24.8■■□□□ 1.56
UBE2D3-201ENST00000321805 ZBTB5O15062 677 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 ZEB2O60315 1214 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 CLTBP09497 229 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 ANTXR2P58335 489 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 PDE4DQ08499 809 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 LRIT3Q3SXY7 679 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 DUSP28Q4G0W2 176 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 CATIPQ7Z7H3 387 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 IGDCC4Q8TDY8 1250 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 MAP3K14Q99558 947 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 SEZ6LQ9BYH1 1024 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 VAT1LQ9HCJ6 419 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 ANO2Q9NQ90 1003 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 PRDM5Q9NQX1 630 aaPredicted RBP24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 PDGFCQ9NRA1 345 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 MAP3K20Q9NYL2 800 aaKnown RBP24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 PCDH10Q9P2E7 1040 aa24.79■■□□□ 1.56
UBE2D3-201ENST00000321805 A0A0U1RQG5 324 aaPredicted RBP24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 MCM5P33992 734 aa24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 GHRHRQ02643 423 aa24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 NECTIN1Q15223 517 aa24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 FSCN1Q16658 493 aaKnown RBP24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 SAMD3Q8N6K7 520 aa24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 CCDC136Q96JN2 1154 aa24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 RIOX1Q9H6W3 641 aa24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 DDX49Q9Y6V7 483 aaKnown RBP24.78■■□□□ 1.56
UBE2D3-201ENST00000321805 DCDC2CA8MYV0 355 aa24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 SLC27A2O14975 620 aa24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 NKRFO15226 690 aaKnown RBP eCLIP24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 PQBP1O60828 265 aaKnown RBP24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 DDAH1O94760 285 aa24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 RNF20Q5VTR2 975 aa24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 TMTC2Q8N394 836 aa24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 SYTL5Q8TDW5 730 aaPredicted RBP24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 TMEM87BQ96K49 555 aa24.77■■□□□ 1.56
UBE2D3-201ENST00000321805 KIAA0355O15063 1070 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 DYNC1LI2O43237 492 aaPredicted RBP24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 CDC45O75419 566 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 CDK7P50613 346 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 IRX5P78411 483 aaPredicted RBP24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 CREB3L3Q68CJ9 461 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 GPR153Q6NV75 609 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 CHST3Q7LGC8 479 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 NSUN6Q8TEA1 469 aaKnown RBP24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 SCFD2Q8WU76 684 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 IWS1Q96ST2 819 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 WDR11Q9BZH6 1224 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 LY9Q9HBG7 655 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 SENP2Q9HC62 589 aa24.76■■□□□ 1.55
UBE2D3-201ENST00000321805 ARVCFO00192 962 aa24.75■■□□□ 1.55
UBE2D3-201ENST00000321805 PRC1O43663 620 aa24.75■■□□□ 1.55
UBE2D3-201ENST00000321805 SZT2Q5T011 3432 aa24.75■■□□□ 1.55
UBE2D3-201ENST00000321805 TRIM43BA6NCK2 446 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 KIF5BP33176 963 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 HSD17B4P51659 736 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 BEX3Q00994 111 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 PPP2R5BQ15173 497 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 SH3RF1Q7Z6J0 888 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 SKAP1Q86WV1 359 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 VTI1AQ96AJ9 217 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 TRIM43Q96BQ3 446 aaPredicted RBP24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 PCDHA1Q9Y5I3 950 aa24.74■■□□□ 1.55
UBE2D3-201ENST00000321805 SMARCA1P28370 1054 aa24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 LIFRP42702 1097 aa24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 CPT1AP50416 773 aa24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 FAAP100Q0VG06 881 aa24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 ZNF654Q8IZM8 581 aa24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 CTCFLQ8NI51 663 aaPredicted RBP24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 TBC1D5Q92609 795 aa24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 RMDN3Q96TC7 470 aa24.73■■□□□ 1.55
UBE2D3-201ENST00000321805 TMEM39AQ9NV64 488 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms