RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MKNK2Q9HBH9 465 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 ZNHIT6Q9NWK9 470 aaKnown RBP9.72□□□□□ -0.85
CLK1-201ENST00000321356 NARFQ9UHQ1 456 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 KLRF2D3W0D1 207 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 ZNF263O14978 683 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 SRGAP2O75044 1071 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 SMARCA1P28370 1054 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 KLK7P49862 253 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 VAV2P52735 878 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 ASIC1P78348 528 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 GSTO1P78417 241 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 SLC20A2Q08357 652 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 CENPPQ6IPU0 288 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 SLC44A5Q8NCS7 719 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 KIAA0895Q8NCT3 520 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 PLAGL2Q9UPG8 496 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 JAG2Q9Y219 1238 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 ABCB11O95342 1321 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 ESYT2A0FGR8 921 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 PDE2AO00408 941 aaPredicted RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 IPO7O95373 1038 aaKnown RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 LCA5LO95447 670 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 FCER1AP12319 257 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 MTIF2P46199 727 aaKnown RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 NAPAP54920 295 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 AMPD3Q01432 767 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 ITIH3Q06033 890 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 MAP9Q49MG5 647 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 HSP90B2PQ58FF3 399 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 CNNM4Q6P4Q7 775 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 ZNF572Q7Z3I7 529 aaPredicted RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 NEK8Q86SG6 692 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 NBPF5PQ86XG9 351 aaPredicted RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 AMOTL1Q8IY63 956 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 ZNF444Q8N0Y2 327 aaPredicted RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 FNBP4Q8N3X1 1017 aaPredicted RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 SETDB2Q96T68 719 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 NOC4LQ9BVI4 516 aaKnown RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 TSPYL1Q9H0U9 437 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 SEMA6BQ9H3T3 888 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 CWC15Q9P013 229 aaKnown RBP9.71□□□□□ -0.85
CLK1-201ENST00000321356 HPCAL4Q9UM19 191 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 SIK3Q9Y2K2 1263 aa9.71□□□□□ -0.85
CLK1-201ENST00000321356 NHSQ6T4R5 1651 aa9.71□□□□□ -0.86
CLK1-201ENST00000321356 NKRFO15226 690 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLK1-201ENST00000321356 CCNT1O60563 726 aaKnown RBP9.7□□□□□ -0.86
CLK1-201ENST00000321356 PRPF6O94906 941 aaKnown RBP9.7□□□□□ -0.86
CLK1-201ENST00000321356 BAG3O95817 575 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 SYF2O95926 243 aaKnown RBP9.7□□□□□ -0.86
CLK1-201ENST00000321356 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 GNA11P29992 359 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 NOVP48745 357 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 DIXDC1Q155Q3 683 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 GRIK5Q16478 980 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 LETM2Q2VYF4 491 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 NEDD1Q8NHV4 660 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 COG1Q8WTW3 980 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 CCDC102AQ96A19 550 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 EEF2KMTQ96G04 330 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 MTMR9Q96QG7 549 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 RTFDC1Q9BY42 306 aaPredicted RBP9.7□□□□□ -0.86
CLK1-201ENST00000321356 TSGA10Q9BZW7 698 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 SRP68Q9UHB9 627 aaKnown RBP9.7□□□□□ -0.86
CLK1-201ENST00000321356 STX8Q9UNK0 236 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 DUSP10Q9Y6W6 482 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 PVALEFA0A1B0GWK0 134 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 SMCO2A6NFE2 343 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 RPS6KA4O75676 772 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 PRLRP16471 622 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 CYP27A1Q02318 531 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 KIF5AQ12840 1032 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 GRB10Q13322 594 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 FKBP15Q5T1M5 1219 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 FOXR2Q6PJQ5 311 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 C15orf52Q6ZUT6 534 aaKnown RBP9.7□□□□□ -0.86
CLK1-201ENST00000321356 C16orf86Q6ZW13 317 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 SMIM5Q71RC9 77 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 CERS3Q8IU89 383 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 TRIM58Q8NG06 486 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 TGFBRAP1Q8WUH2 860 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 RUBCNQ92622 972 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 SECISBP2LQ93073 1101 aaKnown RBP9.7□□□□□ -0.86
CLK1-201ENST00000321356 CAPZA3Q96KX2 299 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 CPVLQ9H3G5 476 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 ZNF287Q9HBT7 754 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 BLOC1S4Q9NUP1 217 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 TMEM51Q9NW97 253 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 ARHGAP20Q9P2F6 1191 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 STK17AQ9UEE5 414 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 SNX12Q9UMY4 172 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 LEMD3Q9Y2U8 911 aa9.7□□□□□ -0.86
CLK1-201ENST00000321356 FOCADQ5VW36 1801 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 hCG_1984214I3L0E3 225 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 ZNF185O15231 689 aa9.69□□□□□ -0.86
CLK1-201ENST00000321356 RNF40O75150 1001 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms