RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 MRPL12P52815 198 aaKnown RBP20.56■□□□□ 0.88
SHISA3-201ENST00000319234 DPYDQ12882 1025 aa20.56■□□□□ 0.88
SHISA3-201ENST00000319234 ELF2Q15723 593 aa20.56■□□□□ 0.88
SHISA3-201ENST00000319234 KMT5BQ4FZB7 885 aa20.56■□□□□ 0.88
SHISA3-201ENST00000319234 PDXDC2PQ6P474 469 aa20.56■□□□□ 0.88
SHISA3-201ENST00000319234 TRIM65Q6PJ69 517 aa20.56■□□□□ 0.88
SHISA3-201ENST00000319234 FAM83AQ86UY5 434 aa20.56■□□□□ 0.88
SHISA3-201ENST00000319234 CUL5Q93034 780 aa20.56■□□□□ 0.88
SHISA3-201ENST00000319234 BAG1Q99933 345 aaPredicted RBP20.56■□□□□ 0.88
SHISA3-201ENST00000319234 NDUFB10O96000 172 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 CLK2P49760 499 aaKnown RBP20.55■□□□□ 0.88
SHISA3-201ENST00000319234 QRICH1Q2TAL8 776 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 CCSER1Q9C0I3 900 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 GLT8D2Q9H1C3 349 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 NFKBIEO00221 500 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 TBC1D12O60347 775 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 MMP14P50281 582 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 TNIP1Q15025 636 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 AK8Q96MA6 479 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 GSDMAQ96QA5 445 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 PPP1R1BQ9UD71 204 aaPredicted RBP20.55■□□□□ 0.88
SHISA3-201ENST00000319234 CD2APQ9Y5K6 639 aa20.55■□□□□ 0.88
SHISA3-201ENST00000319234 A0A1B0GTH6 734 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 NR1I3Q14994 352 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 CDC37Q16543 378 aaPredicted RBP20.54■□□□□ 0.88
SHISA3-201ENST00000319234 TC2NQ8N9U0 490 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 PSTPIP2Q9H939 334 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 DNAI1Q9UI46 699 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 PPP2R2CQ9Y2T4 447 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 FER1L6Q2WGJ9 1857 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 GTPBP6O43824 516 aaPredicted RBP20.54■□□□□ 0.88
SHISA3-201ENST00000319234 BMP3P12645 472 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 CDC25AP30304 524 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 UBA7P41226 1012 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 R3HDM1Q15032 1099 aaKnown RBP20.54■□□□□ 0.88
SHISA3-201ENST00000319234 SPATA1Q5VX52 437 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 FBXO38Q6PIJ6 1188 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 ARHGEF10LQ9HCE6 1279 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 PRDM10Q9NQV6 1147 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 DISC1Q9NRI5 854 aa20.54■□□□□ 0.88
SHISA3-201ENST00000319234 A0A1W2PRG0 241 aa20.53■□□□□ 0.88
SHISA3-201ENST00000319234 WNT10BO00744 389 aa20.53■□□□□ 0.88
SHISA3-201ENST00000319234 STAT6P42226 847 aa20.53■□□□□ 0.88
SHISA3-201ENST00000319234 KARSQ15046 597 aaKnown RBP20.53■□□□□ 0.88
SHISA3-201ENST00000319234 MED15Q96RN5 788 aa20.53■□□□□ 0.88
SHISA3-201ENST00000319234 TMEM39BQ9GZU3 492 aa20.53■□□□□ 0.88
SHISA3-201ENST00000319234 MYOZ2Q9NPC6 264 aa20.53■□□□□ 0.88
SHISA3-201ENST00000319234 PRDM4Q9UKN5 801 aa20.53■□□□□ 0.88
SHISA3-201ENST00000319234 BRCA1P38398 1863 aaKnown RBP20.53■□□□□ 0.88
SHISA3-201ENST00000319234 H2AFXP16104 143 aaPredicted RBP20.52■□□□□ 0.88
SHISA3-201ENST00000319234 UBE2SQ16763 222 aa20.52■□□□□ 0.88
SHISA3-201ENST00000319234 RRAGBQ5VZM2 374 aa20.52■□□□□ 0.88
SHISA3-201ENST00000319234 BTNL9Q6UXG8 535 aa20.52■□□□□ 0.88
SHISA3-201ENST00000319234 TRMT44Q8IYL2 757 aaKnown RBP20.52■□□□□ 0.88
SHISA3-201ENST00000319234 CTAGE1Q96RT6 745 aa20.52■□□□□ 0.88
SHISA3-201ENST00000319234 SGIP1Q9BQI5 828 aa20.52■□□□□ 0.88
SHISA3-201ENST00000319234 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.52■□□□□ 0.88
SHISA3-201ENST00000319234 PCDHA1Q9Y5I3 950 aa20.52■□□□□ 0.88
SHISA3-201ENST00000319234 V9GYY5 206 aaPredicted RBP20.52■□□□□ 0.88
SHISA3-201ENST00000319234 PP2D1A8MPX8 630 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 EDIL3O43854 480 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 CASP1P29466 404 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 TNNI2P48788 182 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 GABPB1Q06547 395 aaPredicted RBP20.52■□□□□ 0.87
SHISA3-201ENST00000319234 CUL4BQ13620 913 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 SYDE2Q5VT97 1194 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 PANX2Q96RD6 677 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 NUP88Q99567 741 aaPredicted RBP20.52■□□□□ 0.87
SHISA3-201ENST00000319234 MTRQ99707 1265 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 SAMSN1Q9NSI8 373 aaKnown RBP20.52■□□□□ 0.87
SHISA3-201ENST00000319234 FAM53CQ9NYF3 392 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 PGAP2Q9UHJ9 254 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 ZBTB21Q9ULJ3 1066 aa20.52■□□□□ 0.87
SHISA3-201ENST00000319234 SYNRGQ9UMZ2 1314 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
SHISA3-201ENST00000319234 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 STAMQ92783 540 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 MTMR9Q96QG7 549 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 AMNQ9BXJ7 453 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 BCS1LQ9Y276 419 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 TMX2Q9Y320 296 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 ARFGEF1Q9Y6D6 1849 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 LTBP3Q9NS15 1303 aa20.51■□□□□ 0.87
SHISA3-201ENST00000319234 TPM1P09493 284 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 ZNF280AP59817 542 aaPredicted RBP20.5■□□□□ 0.87
SHISA3-201ENST00000319234 CALCRLQ16602 461 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 PPP4R3AQ6IN85 833 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 KRT222Q8N1A0 295 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 RASSF8Q8NHQ8 419 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 NAA15Q9BXJ9 866 aaKnown RBP20.5■□□□□ 0.87
SHISA3-201ENST00000319234 MAP3K10Q02779 954 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 GOLGA8FQ08AF8 430 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 GOLGA8DPQ0D2H9 430 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 IKQ13123 557 aaPredicted RBP20.5■□□□□ 0.87
SHISA3-201ENST00000319234 NAALADL2Q58DX5 795 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 CDKAL1Q5VV42 579 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 CABP7Q86V35 215 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 BLZF1Q9H2G9 400 aa20.5■□□□□ 0.87
SHISA3-201ENST00000319234 SHTN1A0MZ66 631 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms