RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 ZNHIT6Q9NWK9 470 aaKnown RBP17.51■□□□□ 0.39
CGGBP1-201ENST00000309534 KIF2AO00139 706 aaPredicted RBP17.51■□□□□ 0.39
CGGBP1-201ENST00000309534 PRR16Q569H4 304 aa17.51■□□□□ 0.39
CGGBP1-201ENST00000309534 PRPF38AQ8NAV1 312 aaKnown RBP17.51■□□□□ 0.39
CGGBP1-201ENST00000309534 CLCN1P35523 988 aa17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 CPXCR1Q8N123 301 aa17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 TTC12Q9H892 705 aaPredicted RBP17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 PDIA5Q14554 519 aa17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 NUP88Q99567 741 aaPredicted RBP17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 ENOX1Q8TC92 643 aaKnown RBP17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 PDGFDQ9GZP0 370 aaPredicted RBP17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 TMEM260Q9NX78 707 aa17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 DNM3Q9UQ16 869 aa17.5■□□□□ 0.39
CGGBP1-201ENST00000309534 PRR12Q9ULL5 1215 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 CTNND2Q9UQB3 1225 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 TCHHQ07283 1943 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 N4BP3O15049 544 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 SPATA1Q5VX52 437 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 NCAPH2Q6IBW4 605 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 FAM20AQ96MK3 541 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 HACL1Q9UJ83 578 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 DEFB129Q9H1M3 183 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 ALAS1P13196 640 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 BLZF1Q9H2G9 400 aa17.49■□□□□ 0.39
CGGBP1-201ENST00000309534 MTIF2P46199 727 aaKnown RBP17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 MOXD1Q6UVY6 613 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 METTL16Q86W50 562 aaKnown RBP17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 A0A1B0GUL6 1792 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 IREB2P48200 963 aaKnown RBP17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 GPR162Q16538 588 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 ZNF658Q5TYW1 1059 aaPredicted RBP17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 LARP4BQ92615 738 aaKnown RBP17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 ARHGAP4P98171 946 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 RASSF7Q02833 373 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 PLA2G4DQ86XP0 818 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 PCDHAC2Q9Y5I4 1007 aa17.48■□□□□ 0.39
CGGBP1-201ENST00000309534 STX17P56962 302 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 TNFRSF25Q93038 417 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 LAMB1P07942 1786 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 C19orf81C9J6K1 198 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 TBX3O15119 743 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 DKC1O60832 514 aaKnown RBP eCLIP17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 PABPC4Q13310 644 aaKnown RBP eCLIP17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 WDR11Q9BZH6 1224 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 GAS7O60861 476 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 GPC2Q8N158 579 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 ZNF397Q8NF99 534 aaPredicted RBP17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 STAMQ92783 540 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 GMLQ99445 158 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 MYH1P12882 1939 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L15C9J2P7 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L13C9JLJ4 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L11C9JVI0 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L18D6R9N7 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L22D6RA61 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L17D6RBQ6 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L19D6RCP7 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L20D6RJB6 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 PLCG1P19174 1290 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L24Q0WX57 530 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 USP17L6PQ6QN14 398 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 NELFBQ8WX92 580 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
CGGBP1-201ENST00000309534 ACTN4O43707 911 aaKnown RBP17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 PLS1Q14651 629 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 SAMD3Q8N6K7 520 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 LRRC37AA6NMS7 1700 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 PTGS1P23219 599 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 NOVP48745 357 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 ZNF280AP59817 542 aaPredicted RBP17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 ANGEL2Q5VTE6 544 aaKnown RBP17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 TEKT3Q9BXF9 490 aa17.46■□□□□ 0.39
CGGBP1-201ENST00000309534 TULP1O00294 542 aaPredicted RBP17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 NLRX1Q86UT6 975 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 DHTKD1Q96HY7 919 aaPredicted RBP17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 NRXN2Q9P2S2 1712 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 TRIM14Q14142 442 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 MORC3Q14149 939 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 IQCB1Q15051 598 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 BTNL9Q6UXG8 535 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 GRAMD1CQ8IYS0 662 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 SCYL3Q8IZE3 742 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 TXLNBQ8N3L3 684 aa17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 XPO4Q9C0E2 1151 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms