RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 MAGEF1Q9HAY2 307 aa14.82□□□□□ -0.04
PPP1CB-201ENST00000296122 PNMA2Q9UL42 364 aa14.82□□□□□ -0.04
PPP1CB-201ENST00000296122 TDP2O95551 362 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 TPM1P09493 284 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 UBASH3AP57075 661 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 PRR16Q569H4 304 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 SLFN12Q8IYM2 578 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 GPC2Q8N158 579 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 ZKSCAN5Q9Y2L8 839 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 FZD9O00144 591 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 IKBKBO14920 756 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 CCT6AP40227 531 aaKnown RBP14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 GPR162Q16538 588 aa14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 GTPBP4Q9BZE4 634 aaKnown RBP14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 MAGEC2Q9UBF1 373 aaPredicted RBP14.81□□□□□ -0.04
PPP1CB-201ENST00000296122 A0A1W2PRG0 241 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 WNT7AO00755 349 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 ACTN4O43707 911 aaKnown RBP14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 PPP1R12BO60237 982 aaPredicted RBP14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 HAUS3Q68CZ6 603 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 CCSER1Q9C0I3 900 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 IFNKQ9P0W0 207 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 COL2A1P02458 1487 aaPredicted RBP14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 SCN9AQ15858 1988 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 SPP2Q13103 211 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 IQCB1Q15051 598 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 CCDC186Q7Z3E2 898 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 PRPF38AQ8NAV1 312 aaKnown RBP14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 CCDC43Q96MW1 224 aaKnown RBP14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 BPIFA3Q9BQP9 254 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 ZHX3Q9H4I2 956 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 CSADQ9Y600 493 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 PSMA7O14818 248 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 WDR46O15213 610 aaKnown RBP14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 ALAS1P13196 640 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 HOXA13P31271 388 aaPredicted RBP14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 USP11P51784 963 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 STX17P56962 302 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 ARHGAP4P98171 946 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 SLF1Q9BQI6 1058 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 NFE2L3Q9Y4A8 694 aa14.8□□□□□ -0.04
PPP1CB-201ENST00000296122 PP2D1A8MPX8 630 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 HSP90AA4PQ58FG1 418 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 NBPF12Q5TAG4 269 aaPredicted RBP14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 NT5C3AQ9H0P0 336 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 MYL1P05976 194 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 UIMC1Q96RL1 719 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 HOMER2Q9NSB8 354 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 KDM3AQ9Y4C1 1321 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 CNTNAP1P78357 1384 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 RPN1P04843 607 aaKnown RBP14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 PLCG1P19174 1290 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 PTGER2P43116 358 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 GSDMDP57764 484 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 TMC6Q7Z403 805 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 CDAN1Q8IWY9 1227 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 GPRC5DQ9NZD1 345 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 STK24Q9Y6E0 443 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 ZNF541Q9H0D2 1346 aa14.79□□□□□ -0.04
PPP1CB-201ENST00000296122 PRAMEF18Q5VWM3 479 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 PPP4R3AQ6IN85 833 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 ABCB11O95342 1321 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 SYNRGQ9UMZ2 1314 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 ERCC5P28715 1186 aaPredicted RBP14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 FANCCQ00597 558 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 MRFAP1L1Q96HT8 127 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 ZNF830Q96NB3 372 aaPredicted RBP14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 DDX60LQ5H9U9 1706 aaKnown RBP14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 QSER1Q2KHR3 1735 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 PDE4DQ08499 809 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 NCAPH2Q6IBW4 605 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 BTNL9Q6UXG8 535 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 TRMT44Q8IYL2 757 aaKnown RBP14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 STK17AQ9UEE5 414 aa14.78□□□□□ -0.04
PPP1CB-201ENST00000296122 M0R2N6 131 aa14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 SFPQP23246 707 aaKnown RBP eCLIP14.77□□□□□ -0.042e-7■□□□□ 10.6
PPP1CB-201ENST00000296122 INPP5BP32019 993 aa14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 SPAG1Q07617 926 aa14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 MTMR2Q13614 643 aa14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 RRP1BQ14684 758 aaKnown RBP14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 CT47A1Q5JQC4 288 aaPredicted RBP14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 SARM1Q6SZW1 724 aa14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 SIAH1Q8IUQ4 282 aa14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 DHX40Q8IX18 779 aaKnown RBP14.77□□□□□ -0.04
PPP1CB-201ENST00000296122 CASP1P29466 404 aa14.77□□□□□ -0.05
PPP1CB-201ENST00000296122 NSMFQ6X4W1 530 aa14.77□□□□□ -0.05
PPP1CB-201ENST00000296122 LDHDQ86WU2 507 aa14.77□□□□□ -0.05
PPP1CB-201ENST00000296122 SCYL3Q8IZE3 742 aa14.77□□□□□ -0.05
PPP1CB-201ENST00000296122 FBXO28Q9NVF7 368 aa14.77□□□□□ -0.05
PPP1CB-201ENST00000296122 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.77□□□□□ -0.05
PPP1CB-201ENST00000296122 PPP2R3BQ9Y5P8 575 aa14.77□□□□□ -0.05
PPP1CB-201ENST00000296122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.77□□□□□ -0.054e-6■■■□□ 16.6
PPP1CB-201ENST00000296122 ADAMTS3O15072 1205 aa14.76□□□□□ -0.05
PPP1CB-201ENST00000296122 PPP1R11O60927 126 aaPredicted RBP14.76□□□□□ -0.05
PPP1CB-201ENST00000296122 EGFRP00533 1210 aa14.76□□□□□ -0.05
PPP1CB-201ENST00000296122 PTGS1P23219 599 aa14.76□□□□□ -0.05
PPP1CB-201ENST00000296122 PPP1R2P41236 205 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms