RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PCDHA4Q9UN74 947 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 HSPD1P10809 573 aaKnown RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 DDX5P17844 614 aaKnown RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 SLFN12LQ6IEE8 588 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 PGRMC1O00264 195 aaKnown RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 PDE6AP16499 860 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 ZBED6P86452 979 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 XPO4Q9C0E2 1151 aaKnown RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 TRPV6Q9H1D0 765 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 PFASO15067 1338 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 GOLGA8MH3BSY2 632 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 KRIT1O00522 736 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 PTK2Q05397 1052 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 NACC1Q96RE7 527 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 ADCY2Q08462 1091 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 SCINQ9Y6U3 715 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 NRKQ7Z2Y5 1582 aa16.13■□□□□ 0.17
SEC16A-202ENST00000290037 ZSCAN20P17040 1043 aaPredicted RBP16.13■□□□□ 0.17
SEC16A-202ENST00000290037 SMCO2A6NFE2 343 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 PRPF3O43395 683 aaKnown RBP16.12■□□□□ 0.17
SEC16A-202ENST00000290037 TSHZ3Q63HK5 1081 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 FOXP3Q9BZS1 431 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 CCNA1P78396 465 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 ELMSAN1Q6PJG2 1045 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 CCDC25Q86WR0 208 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 NRBP2Q9NSY0 501 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 AATFQ9NY61 560 aaKnown RBP eCLIP16.12■□□□□ 0.17
SEC16A-202ENST00000290037 PDE8BO95263 885 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 TTLL1O95922 423 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 ZSCAN26Q16670 478 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 ME3Q16798 604 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 C2CD5Q86YS7 1000 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 FAM178BQ8IXR5 827 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 DDX25Q9UHL0 483 aaKnown RBP16.12■□□□□ 0.17
SEC16A-202ENST00000290037 ERBB3P21860 1342 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 ARID5AQ03989 594 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 DBNDD2Q9BQY9 259 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
SEC16A-202ENST00000290037 SMAPO00193 183 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 PHKG2P15735 406 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 KRT15P19012 456 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 LRRC2Q9BYS8 371 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 RNF8O76064 485 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 ADRA2BP18089 450 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 MKRN3Q13064 507 aaKnown RBP16.12■□□□□ 0.17
SEC16A-202ENST00000290037 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
SEC16A-202ENST00000290037 TSGA10IPQ3SY00 556 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 RNF168Q8IYW5 571 aaPredicted RBP16.12■□□□□ 0.17
SEC16A-202ENST00000290037 CEP104O60308 925 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 KANSL2Q9H9L4 492 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
SEC16A-202ENST00000290037 GNPATO15228 680 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 OAS2P29728 719 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ANKRD20A4Q4UJ75 823 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ANKRD20A8PQ5CZ79 823 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ANKRD20A2Q5SQ80 823 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ANKRD20A1Q5TYW2 823 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 LMTK3Q96Q04 1460 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ENOSF1Q7L5Y1 443 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 FAM160B2Q86V87 743 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 RPUSD2Q8IZ73 545 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 PSMC2P35998 433 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 PICALMQ13492 652 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 CEP120Q8N960 986 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 NPHP4O75161 1426 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 TARSL2A2RTX5 802 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 NSFP46459 744 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 MECOMQ03112 1051 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 BRIP1Q9BX63 1249 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 YARSP54577 528 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 SNRPFP62306 86 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 TTC13Q8NBP0 860 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 NRBF2Q96F24 287 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 SERPINI1Q99574 410 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 UBE4BO95155 1302 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ALX1Q15699 326 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 TRIM15Q9C019 465 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 CDHR2Q9BYE9 1310 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ADAMTS2O95450 1211 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 DBN1Q16643 649 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 DEPTORQ8TB45 409 aa16.11■□□□□ 0.17
SEC16A-202ENST00000290037 SRPRBQ9Y5M8 271 aaKnown RBP16.11■□□□□ 0.17
SEC16A-202ENST00000290037 ATF2P15336 505 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 LARP4BQ92615 738 aaKnown RBP16.1■□□□□ 0.17
SEC16A-202ENST00000290037 SUCLG2Q96I99 432 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 PANK4Q9NVE7 773 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 SENP1Q9P0U3 644 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 C6orf118Q5T5N4 469 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 AP3M2P53677 418 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 POLA2Q14181 598 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 FAM26FQ5R3K3 315 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms